Syngnathus scovelli (Gulf pipefish): 125991946
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Entry
125991946 CDS
T08785
Name
(RefSeq) CUGBP Elav-like family member 2 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125991946
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125991946
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RNA_bind
Motif
Other DBs
NCBI-GeneID:
125991946
NCBI-ProteinID:
XP_049616339
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All DBs
Position
22:complement(282327..367520)
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AA seq
672 aa
AA seq
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MCDRAGSSSAGRTPACLPACLPACLPACLPACLPACLPACLPACLPACLPACLPACVAAC
LPAWLPVSLSVCTYPQSPFPPTMTSAYNLDFLPDMMVESRLLVPAERINGTAGKMNGALE
HSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTF
YTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRV
MFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFA
DTQKDKEQRRLQQQLAQQMQQLNSATTWGSLTGLGGLTPQYLALLQQATSSSNLGAFSGI
QQMAGMSALQLQNLATLAAAAAAAAQNSASPSTANALSSGAASLGALASPAGGAPAGSSA
GGMSSLTSLGTLQGLAGATVGLNNINALAGSVNSMAALNGGLGGGGLANGAAAAAAAAAA
AAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQGAAGSQKEGVWRPGHPADVHAFWER
GLRQSLHRQTDQPQQVLRLRELRQSGVGAGGHPGHERLPDRHEAAQGAAQALQERQQTLL
MSGRARNIISMPGLRVSPPPLPPQQKHCHWPHRPPDEQTKTQASQGWCLFFFFFSLFSSP
ALSRAHPNADAY
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgatcgcgccggctcgtcttccgcggggaggacgcctgcctgcctgcctgcctgc
ctgcctgcctgcctgcctgcctgcctgcctgcctgcctgcctgcctgcctgcctgcctgc
ctgcctgcctgcctgcctgcctgcctgcctgcctgcctgcctgcctgcgtggctgcctgc
ctgcctgcgtggctgcctgtcagcctgtcagtctgcacgtacccccaaagccccttcccc
ccaaccatgacttcggcgtacaatctggacttccttcccgacatgatggtggagagccgc
ctgctggtgcctgccgagcgaattaacggcacggccgggaagatgaacggcgcgctggag
cattcggaccagcccgacccggacgccatcaagatgttcgtgggccagattccgcgctcg
tggtcggagaaggagctgaaggagctgtttgagccctacggcgccgtctaccagatcaac
atcttgcgggaccgcagccagaacccgccgcagagcaaaggctgctgttttgtgacgttt
tacacgcggaaagccgccctggaagctcagaacgcgctgcacaacatcaagaccttaaca
gggatgcaccaccccatccagatgaagcccgctgacagcgagaagtccaacgcggtggaa
gacaggaagctgttcatcggcatggtgtccaagaagtgcaacgagaacgacatccgggtc
atgttctccgcctttggccagatcgaggagtgccggatcctgcggggccccgacggtctg
agtcgaggatgtgcctttgtcacgttttccacccgagctatggcacagaatgcaatcaaa
gccatgcaccagtctcagacgatggagggctgctcatcccccatggtggtcaagtttgcc
gacacgcagaaggacaaagagcagcggcgtctgcagcagcagctggcccagcaaatgcag
cagctcaacagcgccaccacctgggggagcctgacgggcctgggcggactcaccccgcag
tacttggcgttgctccagcaggccacttcctccagcaacctgggcgccttcagcgggatc
cagcagatggcgggtatgagcgcactgcagttgcagaacttggccactttggcagcggcg
gcggcggctgcggcccaaaactccgccagcccgtccaccgccaacgccctgtcctccggc
gccgcctccctgggagcgctggccagcccagcagggggcgcccccgccggctccagcgcg
ggcggcatgagctcgctgacgtcgctgggcaccctgcagggcctggcgggcgccaccgtc
ggcctcaacaacattaacgcgctagcaggtagcgtcaacagtatggcggccctcaacggc
ggcttgggcggcggcggcctggccaacggggcggcggcggcggcagcggcggcggcggcg
gcggcgggcaccatggacgcgctgacgcaggcctactcagggatccagcagtacgccgcc
gccgccttgcccaccctctacagccagtcgctgctgcagcagcagggcgccgccggcagc
cagaaggaaggagtttggcgaccaggacatcctgcagatgttcatgccttttgggaacgt
ggtctccgccaaagtcttcatcgacaaacagaccaacctcagcaagtgcttcggcttcgt
gagctacgacaatccggtgtcggcgcaggcggccatccaggccatgaacggcttccagat
cggcatgaagcggctcaaggtgcagctcaagcgctccaagaacgacagcaaaccttactg
atgtcgggccgggccaggaacatcatctccatgcctggcttgcgtgtctcgccccccccc
ctccccccccagcaaaaacattgtcattggccccaccgcccgccagacgaacaaacaaaa
actcaagcgtctcaaggttggtgtcttttttttttttttttctctcttttctcctcacct
gcgctgagccgcgctcaccccaacgctgacgcctactga
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