Syngnathus scovelli (Gulf pipefish): 125992032
Help
Entry
125992032 CDS
T08785
Symbol
recql
Name
(RefSeq) ATP-dependent DNA helicase Q1 isoform X1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125992032 (recql)
Enzymes [BR:
sscv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125992032 (recql)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
125992032 (recql)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
wHTH-PRTase_assc
RQC
DUF6284
Motif
Other DBs
NCBI-GeneID:
125992032
NCBI-ProteinID:
XP_049616539
LinkDB
All DBs
Position
22:6443125..6458140
Genome browser
AA seq
811 aa
AA seq
DB search
MDGVGQTNDVQAELDSVEAELELVELQIAELLEKKTELNSRKTVLLCKLEEACDVASASS
SSSQSSTTGSEMSKEEMQQYDGTEFAWSKDVTRHLKDSFHLSKFRPLQLRAINLTLSGKD
LFLVMPTGRGKSLCYQLPAMCSDGFTLVVTPLVSLMEDQLMYLKSINGAAEMLNASSSKE
HTKSILAGMINKKPPFKLLYVTPEKIAKSKMFMSRLDKANNANLLSRIAIDEVHCCSQWG
HDFRPDYKLLGILKRQFPKVPVIGLTATATTSILKDCAKILCVSKPISLTASFNRTNLYY
ELRAKVTDEALINDIASLIKNRYKDQSGIIYVFSQKDAESVYSELQQRNILTAPYHASLN
PDDKSRTHRKWASGKVQVVVATVAFGMGIDKPDVRFVIHHTMSKSVENYYQESGRAGRDD
LPADCIIYYGFSDIFRISSMVVMENVGQQKLNQMVTYCQNVDRCRRSLLAVHFDEVWDEK
QCNQMCDICRNAKDVISVDITHHARQVVQILELAESTDEKLTPLKLVEAWMGRGPTKHRK
LMKITTLSRAQAEDVIVYLLLQGYLREDFSFTPYTTHFYLLLGPKAPLLKSQTHMLSMKM
QANLCSSSDVAAPSKEIIDKIFYSFVKENSCPPQSKQKQFKAHKNLARKPNTNPADETDS
YAGEEDTMPQHVVEVNVEINASATSCSKRKSTTPQSARKKPHANSSPVVVPAPFKVVDPP
SYTVPSSPSQASFISETAAEELCDLQNYYRNQLRRINYISHEYLGQPDESGLLACIREPL
KSLRLPRRMTITQTARSLWTRVSSRRKLVRQ
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgttggtcagacaaatgatgttcaggcagagctggactctgtggaagccgag
ctggagctggtggagctccagatagcagagctccttgaaaagaaaactgaattgaattct
cgcaagactgtgctcctgtgcaagctggaggaggcgtgcgatgttgcatctgcatcgtct
tcgtccagccagtcttctacaactggctctgaaatgagtaaagaggaaatgcagcaatac
gatggcacagagtttgcttggtccaaagatgtgacacggcacctgaaggattcattccac
ctttccaagttcagacccctgcagctgagggccatcaatctgacactgtctggaaaagat
ctatttttggtgatgcccacaggcagagggaaaagcctttgctatcagctacctgcgatg
tgttccgacggctttacactggttgtgactcctctggtgtcgctgatggaggatcagctc
atgtacctgaagtccatcaatggggcagcagaaatgctcaatgcttctagtagcaaggag
cacactaagagcattttagctggcatgattaacaagaagcccccatttaagcttttgtac
gtgacacctgagaaaattgccaaaagcaagatgtttatgtctcgcctggacaaagccaac
aatgcaaatctcctgagtcgtatcgctatcgatgaggtgcactgctgcagccagtgggga
catgacttcagaccagattacaaactgttgggcatcctgaagaggcagtttccgaaggtc
ccggtgattggactcacagctacagcgaccaccagcatcctcaaggactgtgctaagatc
ctgtgtgtgtcaaagccaatctcactcacagcctcattcaaccgcaccaatctctattat
gagcttcgtgccaaagttactgacgaggcgttaataaacgacattgcctcgctgataaag
aatcgatacaaggaccagtcaggaatcatatacgtgttctctcagaaggacgcagagtct
gtgtactctgaactccaacagaggaacatcctaactgctccctaccatgccagcttaaac
cctgatgataagtctcgaactcatcgcaagtgggcctccggcaaagtgcaggtggttgta
gctacagtggcgtttggcatgggaatagacaagcctgatgtcaggtttgtcatccatcac
accatgagcaagtcagttgaaaactactatcaagagagtggacgggcaggtcgagacgat
ctcccagctgactgtatcatctactatggcttttctgacatcttccgcatcagctcaatg
gtagtaatggaaaatgttggtcaacagaagctgaatcagatggtgacctactgccagaat
gttgacaggtgtcgtcgctctctattggctgttcattttgacgaagtgtgggacgagaaa
caatgcaaccagatgtgtgatatatgccgcaatgcaaaagatgtcatatctgtggacatt
acccaccatgccaggcaagtggtgcagattttggaactggcagaatccacggatgagaag
ctaacgcctctaaagttggtggaggcctggatggggaggggccccacaaagcacaggaag
ttaatgaagatcaccacgctgtctcgagcacaagctgaggatgtgattgtctacctgcta
ctccaaggctacctcagggaggatttcagtttcactccatacaccacccacttttacctc
ctgctgggccccaaagctcccctgctcaagagtcaaacacacatgctgagcatgaagatg
caggcaaatttgtgttcttcatcggatgtggcagctcccagcaaggagatcattgataag
atcttttactcctttgtaaaagaaaacagctgtcccccccaatcgaagcagaaacaattt
aaagcacacaagaacctagcaaggaaacctaatacaaacccagctgatgagaccgacagt
tacgctggtgaagaagacactatgcctcaacacgtagttgaagtgaatgttgaaattaat
gcatcagctacgtcttgttctaaacgtaaatccaccacccctcaaagcgcgagaaagaaa
ccccacgcaaattcatcgcccgtggtcgttccggctccattcaaagttgttgacccacct
tcttacacagtccccagctctccctcccaggcctcctttatttccgaaactgcagccgag
gagctgtgtgatctacagaactactacaggaatcagctacggagaatcaactacatctcc
catgagtatctggggcagcccgatgagtcggggctgctggcttgtatccgggaaccttta
aagtccttgcgacttccccgcaggatgaccatcacccagacggcccgcagcttatggact
cgtgtcagcagtcggaggaaactggtccgccagtga
DBGET
integrated database retrieval system
