Syngnathus scovelli (Gulf pipefish): 125992037
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Entry
125992037 CDS
T08785
Name
(RefSeq) hepatocyte growth factor
KO
K05460
hepatocyte growth factor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04020
Calcium signaling pathway
sscv04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125992037
04020 Calcium signaling pathway
125992037
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125992037
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sscv04052
]
125992037
00536 Glycosaminoglycan binding proteins [BR:
sscv00536
]
125992037
Cytokines and neuropeptides [BR:
sscv04052
]
Cytokines
Growth factors (RTK binding)
125992037
Glycosaminoglycan binding proteins [BR:
sscv00536
]
Heparan sulfate / Heparin
Growth factors/receptors
125992037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kringle
Trypsin
PAN_1
PAN_4
DUF1986
Motif
Other DBs
NCBI-GeneID:
125992037
NCBI-ProteinID:
XP_049616553
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Position
22:5773139..5797212
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AA seq
720 aa
AA seq
DB search
MRTHAWIYQALVCALLSLLDAGDCRKSRQSLQRYEKSDNHLLVCAECPQSPVVRNSRSQE
HCARKCKKVKKCRAFNFHKHNRKCHLLLFDRFSHGAQKQAGANFTLYEKKDYIRECIMGP
KDNYRGRRSWTKSNITCQAWSDNNINEHTFYPDRYPTQDLRENFCRNPNNDPGGPWCYTT
DPNVRAEECGVPQCSEDVCMTCNGEEYRGKVDHTESGKECQRWDSTRPHKHKFQPKKYRD
KGLTDNYCRNPDNRLRPWCHTMDPKTPWEYCNITMCESDSREDPDVNITTWCVRGKGREY
RGTMNVTPEGVTCQRWDSQFPHQHFFLPDNFKCKDLRDNFCRNPDGSEYPWCFTSDPNQR
RANCTHIPRCDAQAAKKTECYEDNGEAYRGTLAVTRSGIPCANWSLHINSGDSHSTLSHV
GLDKNYCRNPDRDKHGPWCYTDPNTRLAWDYCKLKPCDSTTATPPNATQTPPGPAPTVPK
ISCFVHITTRIVGGHQVRGADGSWVVSIQREKIHMCGGSLIREDWVLTDQQCFTSCVPDL
REYSVQVGLRHLNESSRHPRLKISRLICGPEGSNLVMLKLANPAPVSEGAATIHLPVKEC
HIAEGANCTMYGWGETRDKERERALNAVTMPMVDDDKCSRIKGDAGQRRICAGGKRGEGV
CEKDNGGPLVCHEQERRVVVGVSIQRTKCASSRPALFVNVAFYSQWIYKVFKLYPGPDTN
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgcacgcatggatttaccaggcgctggtgtgcgcgctgctcagcctgctggat
gcaggtgactgtcgaaagagcagacagtctttgcaacgctatgaaaagtctgacaaccac
ctgctggtctgtgccgagtgcccgcagtctcccgtggtgcgcaacagtcgctcgcaggaa
cattgcgcccgcaaatgcaagaaagtcaagaagtgcagggccttcaacttccacaaacac
aacaggaaatgccacttgctcctcttcgaccggttcagccacggggcacagaagcaggcc
ggcgccaacttcacgctgtatgaaaagaaagattacataagggagtgtatcatgggaccc
aaggacaactacagagggaggaggtcttggaccaagtcgaacataacgtgtcaagcctgg
tctgataataacatcaatgaacacacgttttatcccgatcggtacccaacgcaagacttg
agggagaacttctgccggaatcccaacaacgaccccggtggtccgtggtgctataccacc
gatcccaacgtacgggccgaggagtgtggcgtgccacagtgttcggaggacgtgtgcatg
acatgtaacggtgaggaataccggggcaaagttgaccataccgagagcggcaaggagtgc
caacgatgggactccaccagaccccataaacacaagttccagcccaaaaagtacagggac
aaaggcttgacagataactactgtcgcaatccggacaatcgcctccgtccgtggtgccac
accatggatccaaagactccctgggagtactgcaacatcaccatgtgtgagtccgactcc
agggaggatccggatgtgaacatcacgacgtggtgcgtccgcggaaagggtcgagagtac
cgcggcaccatgaacgtaactcctgaaggggtgacgtgtcagcgctgggactcgcagttt
ccccaccagcacttctttcttccagataacttcaaatgcaaggacctgcgtgacaatttc
tgtcgcaacccagacgggtcagagtacccatggtgcttcactagcgatcccaatcagcgc
agagccaactgcacgcacatccccaggtgtgacgcccaggcggccaagaaaactgaatgc
tacgaggacaacggggaggcgtaccggggcaccttagctgtcacacgctcagggattcct
tgcgccaattggtcccttcacatcaacagcggggattctcactctacactatcccatgta
gggctagacaagaactactgccgaaatcctgaccgggacaaacatggcccgtggtgctac
actgacccgaacactcgcctggcttgggattactgcaaattgaaaccctgtgattcaaca
acagccacacctccaaatgcgacgcaaacgccccccggtccggcaccgactgtgcccaag
atctcgtgcttcgtccacatcaccactcgcatcgtcgggggccaccaagtgcgaggggcg
gatggcagctgggttgtcagcatccagagagaaaagatccatatgtgtggaggttctttg
atcagagaagattgggtgttgacggaccagcagtgcttcacatcctgcgttcccgaccta
agggaatacagcgtacaggtgggactacgacacctgaacgagtcgtcgcgtcaccccaga
cttaaaatatctcgccttatctgcggcccggagggatccaacctggtcatgctgaaactg
gccaaccctgcgcccgtgtcggagggagccgccaccattcatcttcccgtcaaagaatgt
cacatcgccgagggcgccaactgcaccatgtatggatggggcgaaaccagagataaagaa
cgggaacgggcgctgaatgccgtgaccatgccgatggtggacgacgacaagtgttcgcgg
attaagggggacgctggacaaagaaggatttgtgccggaggcaagagaggagaaggcgtg
tgcgaaaaagacaatggcggtccactggtgtgccacgagcaggagcgccgtgtagtggtg
ggcgtgagcatccagcgcaccaagtgtgcatcatcacggccggcactcttcgtcaacgtg
gcgttctactcacagtggatttacaaagtctttaagctttaccctggcccggacacgaac
tga
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