Syngnathus scovelli (Gulf pipefish): 125992039
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Entry
125992039 CDS
T08785
Symbol
epyc
Name
(RefSeq) epiphycan isoform X1
KO
K08127
epiphycan
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sscv00535
]
125992039 (epyc)
Proteoglycans [BR:
sscv00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
125992039 (epyc)
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
125992039
NCBI-ProteinID:
XP_049616559
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All DBs
Position
22:6192606..6206829
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AA seq
641 aa
AA seq
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MMKTLVRLVVGLLVLEAVAANPRFSRQADLDSYDDGNYDVDDVNSENQEYDYEDGPTIED
PEIEIGTLAPPDYNYPMPEASLEEQEEEEELPIKPQLIPQGSGGSGVLMGPNTQKEVELR
LTANDILHVSGDFGGSVGSGASGASGVSGSGGSGDPLVSGASGGSVDIIFISGASEEILS
SSGGSGEFLVSGDVDFLISGDRYESGEVSGSGDLLMSGEILGSGDFLLSGHLSGSGDLLI
SGDLSGSGDLLISGDTMGSTASGDSGILIELGSSGSGLELPLGSGGSGDQIGSGFSGDLL
TSGASGGSGVSGDTDESGESGITLLPGELELPLIPTTIPQEASGTSGDFSGVSGTSGDLG
VSGDIDVSGTSGVSASGEPKEPDLILIPDTDKEEGLLPTQETPQEGTGGVETTLGSGLPE
PEEPEEPEVDTKGMPTCLLCTCLGGSVYCDDLKLDNVPPLPKDTTHFYARYNRITKINKS
DFASMNKLKRIDLTANAISSIESRAFMGLPELEELVIRENHISQMPDLPETMTLIDASHN
NIESKGIPKEAFKDMTGLLYLYLTDNEIDYIPVPLPDSLRSLHLQRNNIQSMHEDTFCNL
HDFNYIRNALEDIRLDGNPVNLSRTPQAYVCLPRIPVGDLI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagacgctcgtacgactggtagtgggactgctcgtcctcgaagctgtggcggcc
aatccccggttctctcggcaagccgacctggactcatatgacgacggcaactacgatgtg
gacgacgttaactcggaaaaccaggagtatgactatgaggacgggccgaccatcgaggat
cccgagatagagattggcaccctggctccacctgactacaactacccaatgcccgaggcc
tcgttggaggagcaggaggaggaggaggagttgcccataaagccccagctcatccctcag
ggctcaggggggtccggtgttctcatgggcccaaacacacagaaagaggtggagctgcgt
ctgacggccaatgacatccttcatgtctccggggattttgggggctcagtggggtccggt
gcctcaggagcctctggggtttctgggtcaggaggctcaggagacccactggtctctggt
gcctccgggggttccgtcgatattatcttcatctctggggcttctgaggagattctcagc
agctctggaggatcaggggagttcttggtgtctggggatgtggatttcttgatatcaggg
gatcgctatgaatctggggaggtctctggatctggagacctcctgatgtctggggagatc
ctaggatcaggggatttcctattatccggtcatctttctgggtccggggatctcttgata
tctggagatctatcaggatctggagatctcttgatatctggggataccatgggatccaca
gcttctggagattctggaattctaatagaattgggatcaagcgggtctgggcttgagctc
cctctgggctctggagggtctggggaccaaattggttctgggttctccggagatctcctg
acctcaggtgcctctggaggctctggggtttctggggacacagatgagtctggggagtca
gggataacattattgcctggagagttggaactgcctctcattcctacaactatcccacaa
gaggcatcgggtacttctggagatttctcaggagtttcaggaacctcaggggaccttgga
gtctccggagacatagatgtctctggaacttctggtgtctctgcctctggagaacccaag
gagcctgatttaattctgattcctgacactgataaagaggaggggctgcttccgacacaa
gagacccctcaggagggtactggtggtgtagaaacaacactgggctctgggctaccagag
ccagaggaacccgaagaacctgaggttgacacgaaaggtatgcccacttgcttgctgtgc
acatgccttggtggctcagtctactgtgatgacttgaaactggataacgtaccacctctg
cccaaagacacaactcatttctatgcccgctacaacaggatcactaagatcaacaagtct
gactttgcctccatgaacaagctgaagaggatcgacttgacagccaatgccatttcgtcc
attgaaagcagggcgtttatgggtctgccggagcttgaggagctggtgattcgagaaaat
cacatttcacagatgcccgacctgccggagaccatgactctgattgacgccagccacaat
aacattgagtccaagggcattcccaaggaggcttttaaggacatgaccggcttgctctac
ctgtacctgacggataacgaaatagactacatccctgtgcctcttccagatagtctgcga
tccctacatctacagcgtaacaacattcagtcaatgcacgaggacaccttctgcaacctg
cacgacttcaattacattcgcaatgcgctggaggacatccgccttgacggcaaccccgtc
aacctcagccgaactccgcaggcatacgtttgcctgccccgcatcccggtcggcgacctc
atctaa
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