Syngnathus scovelli (Gulf pipefish): 125992186
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Entry
125992186 CDS
T08785
Symbol
pparaa
Name
(RefSeq) peroxisome proliferator-activated receptor alpha a isoform X1
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03320
PPAR signaling pathway
sscv04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
125992186 (pparaa)
03320 PPAR signaling pathway
125992186 (pparaa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125992186 (pparaa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sscv03310
]
125992186 (pparaa)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125992186 (pparaa)
Nuclear receptors [BR:
sscv03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
125992186 (pparaa)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125992186
NCBI-ProteinID:
XP_049616843
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Position
22:complement(2895354..2909260)
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AA seq
497 aa
AA seq
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MAGDLYCPPSPLGDSLLDSPLCADLMDDLGDISQSVRDQALGFDFPEYQNPGSESESSIA
LDTLTPASSPSPGGCGEASRPGEVSGPLSLECRVCSDKASGFHYGVHACEGCKGFFRRTI
RLGLEYDKCERHCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPQAEKIKLKAESKM
AEKKKEATPALSDHRVLVGRIHRAYMKNFNMNKAKARLILTGKSSEPVKPPTDALVLIIS
TSPPFLLQPFIIHDMETFQLAERTLAASKGDDAEPECSLSAGVLVAAVGCGGLRQREAEA
RLFHCCQSTSVETVTELTEFAKAIPSFQNLDLNDQVTLLKYGVYEALFTLLASCMNKDGL
LVARGGGFITREFLKSLRRPFGDMMEPKFQFAARFNSLELDDSDLALFVAAIICCGDRPG
LVNATLVERLQEGIVQALRLHLQANHPDDAFLFPRLLQKLADLRELVTEHAQLVHDIETT
EDTSLHPLLQEIYRDMY
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggacctctactgccccccgtctccattaggggactcccttttggacagcccc
ctgtgcgctgacctcatggacgatcttggcgatatatcccagtccgtcagagaccaggct
ctggggtttgatttcccggagtaccagaatcctggttcggagtcggagagctccattgca
ctggacactttaaccccggcttccagtccgtcaccggggggctgcggggaagcatcgcgg
cctggtgaggtctcgggccccctcagcttggagtgcagggtgtgttcggacaaagcttcg
gggttccactacggcgtgcacgcctgtgagggctgcaagggtttcttcaggagaaccatc
cggctcgggctggagtacgacaagtgcgaacgccattgcaaaatccagaagaagaaccgc
aacaagtgccagtactgccgcttccacaagtgcctttccgtgggcatgtctcacaacgcc
atccgcttcggccgcatgccccaggcggagaagatcaagctgaaggcggagagcaaaatg
gccgagaagaagaaagaggccaccccggcgctgtccgaccaccgggtgctcgtcgggcga
atccaccgagcctacatgaagaacttcaacatgaacaaagccaaagcgcggctcatactc
accgggaagagcagcgagccggtaaagccgccgacggacgcgctcgttctcatcatctcc
acctcacctccttttcttcttcagccgttcatcatccacgacatggagacgttccagctc
gccgagaggacgctagcggcgtccaagggggacgacgcggaacccgagtgcagcctctcg
gcgggggtcctggttgccgccgtggggtgcggcgggctccggcagagggaggccgaagct
cgtctcttccattgctgccagagcacctccgtggagacggtcaccgagctcaccgagttc
gccaaagctattccaagcttccagaacctggatttgaatgatcaggtgactctcctcaag
tacggcgtttacgaggctctcttcacgctcctggcctcgtgcatgaacaaagacggcctc
ctggtggcgcgcggcggcggcttcatcacccgcgagttcctcaagagcctccggcggccc
tttggcgacatgatggaacccaagttccagttcgccgcacgcttcaactcccttgagctg
gacgacagcgacctggctctcttcgtggccgccatcatctgttgcggagaccgtccgggt
cttgtgaacgcgacgctggtggagaggctccaggaaggaatcgtacaggcgctacggctc
cacctgcaggccaaccaccccgacgacgccttcctcttcccgaggctgttgcagaaatta
gccgacctccgggaactggtgacggagcacgctcagttggtgcacgatatcgagaccacc
gaggacacctcgctgcaccccctcctccaggaaatctacagggacatgtactaa
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