Syngnathus scovelli (Gulf pipefish): 125992210
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Entry
125992210 CDS
T08785
Symbol
gata3
Name
(RefSeq) transcription factor GATA-3 isoform X1
KO
K17895
GATA-binding protein 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125992210 (gata3)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
125992210 (gata3)
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Gene cluster
GFIT
Motif
Pfam:
GATA
DUF7573
Zn_Ribbon_TF
ArfGap
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
125992210
NCBI-ProteinID:
XP_049616898
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Position
22:669340..676450
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AA seq
531 aa
AA seq
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MEVSAEQPRWMSHPHPAVLNEQHPGGHHPGLGHSYMDAAQYPLADDVDVLFNIDAQGNHV
SPYYGNSVRAVQRYPPPPHSSQVCRPSLLHGSLPWLEAAGGKGIGAHHGASPWNLSPFPK
NPLHHHHHHHHHHGSPGALSVYPPTSSTSSSSSSSSSLSGGHSSPHLFTFPPTPPKDVSP
DPGLSTPGSGGGGGGPRPEDKECVKYQVTLGDSMKLETAHGRGVAAAAAAAAAAAAALGP
GPSTTAAAHHPIATYPPPYVPDYGPGLFPPSSLIGGSSSTYGSKTRPKTRSCSEGRECVN
CGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLVRARATKAPLDDICVSLS
LSLSLSSSLSVSLCLFPSPGRSRPISCRKLTRQVQSAARRAGTSCANCQTTTTTLWRRNA
NGDPVCNACGLYFKLHNINRPLTMKKEGIQTRNRKMSSKSKKSKKSLQDGGMDDFSKSLM
DKSSSFSPAALSRHMSSFPPFSHSGHMLSTPTPMHPSFAPHHPSSMVTAMG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgagcgcggagcagccccgctggatgagccacccgcacccggccgtgctgaac
gagcagcaccccggcgggcaccatccgggcctgggccattcctacatggacgcggcgcag
tacccgctggccgacgatgtggatgtactctttaatatcgacgcccagggcaatcacgtc
tctccctactacggcaactcggtgcgggccgtgcagaggtacccaccgccaccgcacagc
agccaagtgtgccgaccgtcgctgctgcacggctcgctgccgtggctggaggccgcgggt
ggcaaaggcatcggcgcgcaccacggcgcgtccccgtggaacctgagtcccttccccaag
aacccgctgcaccaccatcaccatcatcaccaccaccacggctccccgggcgccctctcc
gtctacccgccgacctcgtccacctcctcgtcatcgtcgtcgtcgtcgtcgctgtccggc
ggccactccagtccgcacttgttcacattcccgcccaccccgcccaaggacgtgtccccg
gacccgggcctgtccacgccgggttcgggcgggggcggcggcggcccgcgcccggaggac
aaagagtgcgtcaagtaccaggtgacgctgggcgacagcatgaaactggagacggcgcac
gggcgcggggtggcggcggcggcagcggcagcagcggcggctgcggcggcgctggggccg
ggcccctcgacgacggcggcggcccaccaccccatcgccacttacccaccaccttatgtc
cccgattacgggccaggcctcttcccaccaagtagcctgataggtgggtcctcttctact
tatggttccaaaacaagaccaaaaacaaggtcgtgttcagagggccgggagtgcgtgaac
tgcggcgccacgtcgaccccgttatggcggcgggacggtacgggccactatctgtgtaac
gcctgcggcctgtaccacaagatgaacggccagaaccggcccctcatcaagcccaagcgg
cggctggtacgtgcacgcgccaccaaggcccctcttgatgacatctgcgtctctctctcc
ctctctctctccctctcttcctctctgtctgtctctctctgtctgtttccctctccagga
agaagtaggcctattagctgcaggaaattgactcgacaagtgcagtcggcggccaggcgc
gcgggtacgtcgtgcgccaactgccagacgaccaccaccacgttgtggaggcgcaacgcc
aacggcgaccccgtctgcaacgcctgcggactctacttcaagctgcacaatatcaaccga
cctctgaccatgaagaaggaaggcatccagacgcgcaaccgcaagatgtccagcaagtcc
aagaagagcaaaaaatccctgcaggacggcggcatggacgacttctccaagagcctgatg
gacaagagcagctccttcagcccggccgccctgtcccgccacatgtcctccttcccgccc
ttctcgcactcgggccacatgctcagcacccccacgcccatgcacccctccttcgccccc
caccacccgtccagcatggtgacggccatgggctag
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