Syngnathus scovelli (Gulf pipefish): 125992215
Help
Entry
125992215 CDS
T08785
Name
(RefSeq) F-box DNA helicase 1 isoform X1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125992215
Enzymes [BR:
sscv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125992215
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125992215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
F-box-like
AAA_19
F-box
UvrD_C
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
PhoH
AAA_12
AAA_22
XH
Motif
Other DBs
NCBI-GeneID:
125992215
NCBI-ProteinID:
XP_049616971
LinkDB
All DBs
Position
22:3366541..3371434
Genome browser
AA seq
992 aa
AA seq
DB search
MEFALKARAKRRLLNADELEKSEAGIQALTNPQSLSRSRGSTSNLNPRPTKRPKCASITS
STENGFPPCTNGLRGEPEDEDDERSLPSDLEEEPENNVDYLEGITSAMFEDEFDSSDELV
HEELDVEPLPDATYGLLGSSKELLQPQGCIDDLPEELLRQVLSLLPARDLYRSAILVCNR
WRHVIEDDKFMPFKKEYYRFMMNEEVTMAEVTSSLIKARVIEPAMSQHGIRNLVILMSHH
KFGTVVNPTDVLEQVKKHRFFPHAEASIRLRIRNVPKCPNLHAEGPNPFAAMAVILLLSE
SVEDVQALVTLLNDCMSYSDVTEFFSHMAMVLLAAVRNKVKLSQRLHYNIYYVLHLRENG
PFSVSCSEGRSSRMKLTSEQLNILSHDIQKDHLVKIVAFAGTGKTTTLIKYAEQRPHLRF
LYVAFNKSVTSEASQRFPPNVDCKTVHSLAYKDIGKFYQKKLTFNLNVFSINTVLPKGRG
GYAKAKVVAQTLNNFMSSVNETIERSHVPFSQVSLQGNKTLITEEEKELYVQDARNIWMK
MKDLNEIEEKSYHITHDGYLKLWQLQKPKVSLSDQYDVIFIDEAQDCTPTIMDVLLIQKC
GKILVGDPHQQIYTFRGAINALQTVAHTHIYYLTQSFRFGAEIAYVGASILTVCKNVSKI
LVGGRQKGGVFDEKAAQAQQDIANGISPRQGNTAILFRCNFGVFSEAVRLTEANNKCNIH
FIGGVDNIGLSQIKDMWYLMEGKDNRKLIKDYLIGSFAKIQPNPFEALKLYVNKTDDRDL
EAKLTIVTKYTNRIPDLVKCLRRHSEDNVKEADFILGTVHKAKGLEFEIVKVGFDFIIPC
PRVNSHNSHDSHHVNGFSFSNFPNDEWNLLYVAVTRARTTLIITSSIHYIIIRTGEHFLK
SVMPATPLKAGATPPCLISACPNCITPGAAFMMCKRRMTHMGGRSAEGALCERCAWTSVG
PIAYLMTDDVLSMAEVPERLNQCLHVNFHAPL
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgcactaaaagcgagagccaagaggaggcttttaaatgcagacgagctagaa
aaaagtgaagcgggtatccaagccctcaccaacccccaaagtttaagcagaagccggggc
agcacttccaatctgaacccaagacctaccaagagaccaaaatgtgcatcaatcacctct
agtacggagaacggcttccccccatgcacaaatggactccgtggcgaaccagaagatgag
gacgatgagcgatcgttgccctcagacctggaggaggagcctgaaaacaacgttgactac
ttagaaggaataacttctgccatgtttgaagatgagtttgactcttctgacgagttggtg
cacgaggagctggatgtggaacccctgcctgatgccacctacggtctcctcgggagtagc
aaggagctgctgcaacctcagggttgtattgacgacctcccggaggagttgctcaggcag
gtcctcagcctccttcctgctcgagacctgtacaggagcgccatactcgtgtgcaatcgg
tggcgccacgtgattgaggatgacaagtttatgcccttcaagaaagaatactaccgcttc
atgatgaacgaagaggttacaatggccgaggtcacctcctcattgatcaaggcccgcgtc
atagagccagcaatgtcacagcacggcatccgcaacctcgttattttaatgtcgcatcat
aagtttggcacggtggtgaatccgacggacgttttggagcaagtgaagaaacatcgcttt
ttcccccatgccgaggcctccatcagattacgcattcggaatgttcccaagtgcccgaat
ctgcacgcggagggccccaacccgtttgcagccatggcggtgatcttactcctcagcgag
agcgtggaggacgtgcaggcgttggtgaccttgctgaacgactgcatgtcgtacagcgac
gtcaccgagttcttcagtcacatggccatggtgctgctggctgccgtgaggaacaaggtg
aagcttagccagaggttgcattacaacatctactatgttcttcacctgagggagaatggc
cccttttcggttagctgctcggaaggccggagctcgcgcatgaagttgacctcagaacag
ctgaacatcctcagccacgacattcagaaggaccacttggtgaagattgttgcctttgca
ggtacggggaagacgaccacgctgatcaagtacgccgagcagcggccgcacctccgcttc
ctgtatgtggccttcaataaatcggtcactagcgaagcctcgcagcggttcccgcccaac
gtggactgcaagactgtccactcgctggcctataaagacatcgggaaattctaccaaaag
aagctcaccttcaatctgaacgtcttctccatcaacacggtcctgcccaaaggtcgaggg
ggttacgccaaggccaaagtggtagcccagactctcaacaacttcatgtcttccgtcaac
gagaccatcgagcggagccacgtgcctttctcgcaagtgagtcttcaaggcaacaagacg
ctcatcactgaagaagaaaaagagttgtatgtccaagatgcaagaaacatttggatgaaa
atgaaggacctcaatgagattgaagaaaaatcctaccacatcactcacgacggttactta
aagttatggcagctccaaaagccaaaggtcagcctctccgaccaatacgacgttattttt
atcgacgaagcccaggactgcacccccaccatcatggacgtgctgctgatccagaaatgc
ggcaaaatcctggtgggcgatccccaccagcagatctacaccttcagaggtgccattaat
gctttgcagactgtggctcacacccacatctactacctaacacagagtttccgctttggc
gccgagatcgcttacgtgggggccagcatcctcacggtgtgcaagaatgtcagcaaaatt
ctcgtcgggggaaggcagaaagggggcgtgtttgatgaaaaagctgcccaggcccaacag
gacatagccaatgggataagcccccgtcagggaaacacggccattttgttcaggtgcaat
tttggcgtgttcagtgaagccgtgcggctaaccgaggccaataacaagtgcaacatccac
ttcattggcggtgtggacaacatcgggttgagtcagatcaaggacatgtggtacctaatg
gaaggcaaagataaccgcaaactgatcaaggactacctgattggatcgtttgcaaaaatc
caaccgaacccctttgaggcgttgaagctgtacgtcaacaagacggacgaccgtgacctg
gaggccaagctgaccattgtgaccaaatacacaaatcgcattcctgatctggtgaagtgc
ctgaggagacactcggaggacaacgttaaagaagcagacttcatccttggcacagtccac
aaagccaaaggcctggaatttgaaatcgtgaaggtcggcttcgactttatcattccctgc
cccagagtcaacagccacaacagccacgacagccaccacgtcaacggattttcttttagt
aacttccccaacgacgaatggaacctgctctacgtggcggtgactcgtgctcgaacgaca
ctcatcatcacaagtagcatccactacatcatcatccggactggcgagcacttcttaaag
tcggtaatgcccgctacgccgctgaaagcgggcgcgacgccgccgtgcctcatttccgcc
tgtcccaattgcatcacgcccggcgccgctttcatgatgtgcaaaagacggatgacacat
atgggtggccggtccgccgagggcgcgctgtgcgagaggtgcgcgtggacaagcgtcggc
cccatcgcttacctcatgacggacgacgtgctctccatggctgaagttccagagcgcctc
aaccagtgtctccacgttaatttccacgcgccgctctag
DBGET
integrated database retrieval system
