Syngnathus scovelli (Gulf pipefish): 125992222
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Entry
125992222 CDS
T08785
Symbol
rbm17
Name
(RefSeq) splicing factor 45 isoform X3
KO
K12840
splicing factor 45
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125992222 (rbm17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125992222 (rbm17)
Spliceosome [BR:
sscv03041
]
Complex A
U2 snRNP components
U2 related factors
125992222 (rbm17)
Complex B
125992222 (rbm17)
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Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
125992222
NCBI-ProteinID:
XP_049616998
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All DBs
Position
22:3373223..3378161
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AA seq
432 aa
AA seq
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MSLYDDLGVGASDTKTEGWSKNFKLLQSQLKVKKATLTQAKSHRTKQTTVMAPVIDLKRG
GPTVEDRQIPDTPPIVAAAVKETAPAGFSSGDVLIPLADEYDPMFPNDYEKVLKRHREDR
QRQREQERQKEIEDREKKRKDRHEGGAPSGFSRFPAAEEDSDEDEDYEKERRKRSMGGAA
IAPPSSLVDRDGSSAYPYEDEGRPSRGSKAAIPPPMYEDSERPRSPPGPTSSFLANMGGT
VAHKIMQKYGFKEGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDLAEKPGAPAPVAPETP
GGAGGTTQLPFCSSFWGSVDSKKADANPLTEILKNPTKVVLLRNMVGRGEVDEDLEGETK
EECEKYGKVIKCVIFEIAEVPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFY
DQDKFRVFNLGE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtatgatgacctcggcgtgggtgcaagtgacaccaagaccgaaggatggtcc
aagaacttcaagctgctgcagtcccagctgaaggtgaagaaggcaactctgacccaagct
aagtcccatcggacgaagcaaactactgttatggctcctgtcatcgatttaaagcgaggc
ggccccaccgttgaagacagacaaatcccagacactcctccgattgtcgctgctgcagtc
aaggagaccgcccccgccggcttctcctctggagatgtgctgatcccgcttgccgacgag
tacgaccccatgtttcccaacgactatgagaaggtgttgaagcggcacagggaggatagg
cagcggcagagggagcaggagcgccagaaggagattgaggacagagaaaagaaaaggaaa
gacagacatgaaggaggagccccaagcggcttctcgagattcccagcagcagaggaggac
tctgacgaagacgaagattatgagaaggagcggcgaaaacgaagtatgggtggtgctgcc
attgctcctccttcatcacttgtggacagagatggttcttcggcatacccatacgaggat
gaaggtcgtccaagcagaggctcaaaagccgccatccctccgcccatgtacgaggactcg
gagcggccgcgttccccacccggaccaaccagttccttcctggccaacatggggggcacc
gtggctcacaaaatcatgcagaagtacggcttcaaggagggccaaggcctgggcaagcac
gagcaggggctgagcacggcgctgtctgtggaaaagacgagcaaaagaggtggcaagatt
atcatcggggacttggcggaaaaaccaggggctccagcgccagttgctcccgagactccc
ggaggagcaggtgggaccacccagttgccgttctgttcttcgttttggggctcagtggat
tccaagaaggctgatgcaaacccgctgacagagattctcaaaaatcctaccaaggtggtc
ctactgaggaacatggtgggccgaggagaggtggacgaagacttggagggcgagaccaaa
gaagagtgcgagaaatacggcaaagtcattaaatgcgtcatcttcgagatcgccgaagtg
cccgatgacgaagcggtccgaatatttctggagtttgaaagagtggagtcggccattaaa
gctgtggtggatctgaacggacgttatttcggcgggcgggtcgtcaaggcctgcttctac
gatcaagacaaatttcgggtttttaacctgggcgagtag
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