Syngnathus scovelli (Gulf pipefish): 125992301
Help
Entry
125992301 CDS
T08785
Symbol
eri1
Name
(RefSeq) 3'-5' exoribonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125992301 (eri1)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125992301 (eri1)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125992301 (eri1)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
125992301 (eri1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Pox_D5
Motif
Other DBs
NCBI-GeneID:
125992301
NCBI-ProteinID:
XP_049617174
LinkDB
All DBs
Position
22:1365889..1368418
Genome browser
AA seq
337 aa
AA seq
DB search
MEEHKENIHGKDVNVKSNGDNDDKPDSTKCPKEGEAPPQASNSNFSHPVYKEIALANGHI
NRMSKEELRAKLSQLKLDTRGVKDVMKKRLKSHYKKQKLTQSAADSDSEPGGFPYDYICV
VDFEATCEEDNPPDFLHEIIEFPMVLISTHTLEIVGTFQEYVKPQLYPTLSDFCVNLTGI
TQDKVDAAKPFPAVLKQVVKWLAERELGTKYKYTFLTDGAWDMSKFLNIQCRVSQLRYPK
FARKWINIRKSYGNFYKVPRTQTKLSTMLDNLGLQYEGRPHSGLDDSRNIARVALRMLQD
GCQLRVNEQLHGGQLLTVPSWAPAEGAPPPCWPGSRK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcacaaggaaaatattcacggcaaggatgtgaacgtcaagtcaaacggagac
aatgatgataagcctgacagcaccaaatgtcccaaagaaggagaagctcctcctcaggca
tccaacagcaacttcagccaccccgtgtacaaggagattgccttggccaacggccacatc
aaccgcatgtccaaggaggagctgcgtgccaagctgtctcagctcaagctggacaccaga
ggcgtaaaggacgtgatgaagaagcgactgaagagccactacaagaagcagaagctgacg
cagtcggcggccgactccgactccgaaccgggaggcttcccctacgactacatctgcgtg
gtagactttgaggccacgtgcgaggaggacaacccaccggacttcttgcacgaaatcatt
gagttccccatggtgctcatcagcacgcacaccttggagattgttggaacatttcaggaa
tacgtcaaaccacagttgtacccgacgctgtcagacttctgtgtgaaccttacgggaatc
acacaggacaaggtagacgcggctaagccattcccggcggtcctgaagcaagttgtgaag
tggcttgcggagcgggagctgggcaccaagtacaaatacactttcctcacggatggcgcg
tgggacatgagcaagttcctcaacatccagtgccgcgtcagccagctccgatacccaaag
tttgccaggaagtggatcaacatccgcaagtcctacggcaacttctacaaggtgccgcgc
acgcagaccaagttgagcaccatgctggacaatctgggcctgcagtacgaaggtcgcccc
cactcgggcctggacgactcgcgcaacatcgcccgcgtggcgctgcgcatgctgcaggac
ggctgccagctgcgcgtcaacgagcaattgcacggcggccagctgctcaccgtgcccagc
tgggcgcccgccgagggagccccgcctccttgctggccgggcagccgcaagtag
DBGET
integrated database retrieval system
