Syngnathus scovelli (Gulf pipefish): 125992302
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Entry
125992302 CDS
T08785
Symbol
nup37
Name
(RefSeq) nucleoporin Nup37
KO
K14302
nuclear pore complex protein Nup37
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125992302 (nup37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125992302 (nup37)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125992302 (nup37)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125992302 (nup37)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125992302 (nup37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WDR55
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Motif
Other DBs
NCBI-GeneID:
125992302
NCBI-ProteinID:
XP_049617175
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All DBs
Position
22:1276656..1282057
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AA seq
333 aa
AA seq
DB search
MSVARPLGAGDDSSRGPSYTVPCDDYVHVVEFSPFASGMPASLLAYGCNQCVVVGTCLFQ
EEDMNVEGVEFNVLRAFHHDSRVDVLAWSPESRLDRIPTIRICTAAPDRKLRLLTSGLQD
QHEVKVMEGHSSYINHLVFEPSEGKQIASVSDDHTCRVWDLDGNECALFRLRSPGISVCW
HPEEVFKLMVAEQKGTVRFYDLLSQQAILSLDCGQSPLCAADWCLANTIKVGAVAGSDWL
IWDITRSSYPQERRPAHRQKAQQFKWSRAQENLFATTGCTGKVSSQLLIHHLGHPQPVTV
GTVTVGSGLSWHRTLPLCVIGSDRKLCFWMTEM
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgccaggccgcttggcgctggggacgacagcagccgaggccccagctacacg
gtgccgtgtgatgactacgttcacgtggtggaattcagccccttcgcctcgggcatgccc
gcctccctgctggcttatggctgcaaccagtgcgtggtggtgggcacctgcctcttccag
gaggaagacatgaacgtggagggggtggagttcaacgttctccgtgctttccatcacgat
tcacgagtggacgtgctggcttggagcccggagtcccgcctggacaggattcccacaatc
agaatctgcacggccgcccccgacagaaaactccgtttgttgacgtcgggccttcaggat
caacacgaggtcaaggtgatggagggccacagcagctacattaaccatttggtcttcgag
cccagcgaagggaagcaaatcgcttccgtcagcgatgaccacacttgcagggtgtgggac
ctggacggaaacgaatgcgcccttttccgcctccgctctcccggcatcagcgtgtgctgg
cacccggaggaggtcttcaagctgatggtggccgagcagaagggcacggttcgcttctac
gacctcctgagtcagcaggccatcctgtcgctggactgcggccagtcgccgctctgcgcc
gccgactggtgcctggccaacaccatcaaggtgggcgcggtggcgggcagcgactggctc
atctgggacatcacccgctccagctacccccaggaacgaaggccggcgcacagacagaaa
gcccagcagttcaagtggtcacgggcccaagagaaccttttcgccaccaccggatgtacc
ggcaaggtcagcagccagctgctcatccaccatctgggccacccgcagccggtgacggtg
ggcacggtgacggtgggctcgggcctcagctggcaccgcacgctcccgctgtgcgtgatc
ggcagcgaccgcaaactttgcttctggatgacggagatgtaa
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