Syngnathus scovelli (Gulf pipefish): 125992390
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Entry
125992390 CDS
T08785
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125992390 (caprin2)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
125992390 (caprin2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
125992390
NCBI-ProteinID:
XP_049617322
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Position
22:6831723..6844914
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AA seq
765 aa
AA seq
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MVQLPPSPTVGVTLVDEQSEEKEKLEGNVIVVSPKGDSPESLGALPSFDFPNAYYGYENY
IEDGLICLKHKVRNLEKKKLKLEHYKRCLACGETLNKDQMAATEKYEQVVHNLEFAKELH
KTLGSLTQNLLRSQKKAVKREKLARMEEEKKRLSMVLQVQHLLNSVQQAHVKKDLLTGHN
QAPCLPAKHLNSLSQLATLLGVRQDDRLSLEEWMEEASVMYIDLLEGEEKTVAGSTFKLL
KEEVTRLLKCKYFACLPSKATLAKPKLTQPEVSKENYKEENDSPDNWDFELPNEGVSPQA
AAKTSWKAAANLIPKITGKCKSAGSRQEKEKKVKTERNSLIDLHKPLPAMIFSSPAFPKD
PILRNKYLEDLMTKIHGSFSFMQDSLIDCESTSENGISRFKKEQPELSSPLALKNSSDPL
PKEMHSTPLPIRLLDHNTRLTNGDQSLKSYELEISSNTLVAESGKISPCNRMAPSISIPA
PKHAFSTPPAKQTVTTVQFHDIPSVFNGDANVEPMYINSYTQTPPEFAPTEDDSHTLGGT
CIFQSHLKNYGPLFGAPRDSGSQHVCGCGVQHHSSAAWCESSKMNSPDRAELTTVDSGHS
DSLPVSIIEVSHSPQGHHRTSLLPMQFYPLSQPLRVAFTASRTVNFAPGNLDQPIVFDQL
HSNMGEMFDTHIGRFTCPVNGMYVFMFHILKLAINVPLYVNLMCNEEVMVSAYANDGAPD
HETASNHAILPLFQGDQVWLRLHRGAIYGSTWKYSTFSGFLLYQD
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctccctccttccccaacggtgggtgtcacacttgttgatgaacaatcagaa
gagaaggaaaaattagaaggcaatgtgattgttgtgagtccaaaaggagattcacctgaa
agcctcggtgccctgccgagctttgatttccccaatgcctattatgggtatgaaaactat
atagaagatggacttatctgcctcaaacacaaggtccgcaacttggagaaaaaaaagttg
aaactggaacactataaaagatgcctggcctgtggtgagactttaaataaagatcaaatg
gctgctactgagaaatatgagcaggtggtgcataacctggagtttgccaaggagctccat
aaaacactcggcagcttgactcaaaacctactgaggtcacagaagaaggcagtaaagagg
gagaaactggcaagaatggaggaggagaagaaacggctcagcatggtgctccaagtccaa
caccttcttaacagcgtacaacaggcccatgtcaagaaagacctgctaaccggacacaac
caggcgccgtgcctaccagcaaagcatctcaacagcttgagccagctggccaccttgctc
ggagtaaggcaggatgacagactgagtttagaggagtggatggaggaagcgtctgtaatg
tatattgaccttctggaaggagaagaaaaaacagtggctggatcaacatttaaattgctt
aaagaggaggttaccaggttattaaagtgcaagtatttcgcttgtcttccttccaaagct
actctagcaaaaccaaaattgacacagcctgaagtttcgaaagagaattataaggaagag
aatgactctcctgacaactgggattttgagctccccaatgaaggcgtttcacctcaggct
gcagccaagacatcatggaaagcagcagccaatctaatccctaaaattaccggcaaatgc
aaatcagctggtagtagacaggaaaaagagaagaaagttaaaacagagcgaaattccttg
attgaccttcacaagcctttacctgcaatgatattcagctctccggcctttcctaaagac
cctatcttgaggaacaaatacttggaggacctgatgaccaagatccacggctctttcagt
ttcatgcaggattctcttatagattgcgagtccacttcagaaaatggaatctccagattt
aaaaaggagcaaccagaattgtcatctcctctggctttgaaaaactcaagtgatcccctg
cccaaagaaatgcattccaccccactgcctatcaggcttctggaccacaacaccagactg
acaaatggggatcagagcctaaaaagctatgagctggagatttcctcaaatacactggtg
gctgaatcaggaaagatttctccctgtaacaggatggcaccaagcatctctattccggct
cccaagcatgcattttccacaccgcctgcaaagcaaactgtcactaccgtacaatttcat
gatatcccatcagtcttcaatggggatgcaaatgtagaaccaatgtacatcaattcctac
acccaaacaccacctgagtttgcacccacagaagatgactcgcacacactgggggggaca
tgcattttccaatctcatcttaagaactacggccctctctttggtgccccaagagattct
ggatcccaacatgtctgtggatgtggagtacagcatcattccagtgcagcctggtgtgag
tcgtcaaagatgaacagcccagaccgtgcagaattgacaacggtggattcaggacatagc
gattcccttccggtctccatcattgaggtctcgcatagtcctcaaggccaccatcgcact
tcccttcttcctatgcaattttaccctctctcccagccactgagagttgcattcacagcc
tctcgcactgtcaactttgcaccgggcaacctagaccagcccattgtttttgatcagctg
cacagcaacatgggagagatgtttgacacccacattggacgctttacctgtcctgttaat
ggaatgtatgttttcatgttccacatccttaaactagcaattaatgtgccactttatgtc
aacctcatgtgtaatgaagaagtaatggtgtcagcctatgctaatgatggcgcaccggat
catgagacagctagcaaccatgccattttacctctcttccaaggagatcaggtttggctt
agattacatcgtggtgctatttatggaagcacttggaagtatagtacattttctggcttt
ttgctttaccaggactga
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