Syngnathus scovelli (Gulf pipefish): 125992453
Help
Entry
125992453 CDS
T08785
Symbol
tnpo3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03013
Nucleocytoplasmic transport
sscv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125992453 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125992453 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125992453 (tnpo3)
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
125992453 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
TOR1L1_N
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
125992453
NCBI-ProteinID:
XP_049617465
LinkDB
All DBs
Position
22:complement(18772..25701)
Genome browser
AA seq
923 aa
AA seq
DB search
MEGGKPSLSLVYQAVQALHHDPDPAGKERASMWLGELQRSMYAWEISDQLLQLKQDVESC
YFAAQTMKMKIQTSFYELPPDSHGALRDSLLSHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYNGEISSMPFLMEILTVLPEEVHSRSLRIGANRRTDIIEDLAYYSSTV
VTLLGSCVEKTGSDEKMLIKVFRCLGSWFNLGVLDSNFMASNQLLMILFQVLQRDETSSN
LHEAAADCVCSSLYAIENVDTNMSLALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLETTVRSPGRGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGENLYKINDVA
LNGVFRPYIQRLLHCLARHCQLDPDHEGIPEETDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLKDGNPPWVVTEAVLFIMAAIAKSVDPENNPTLLEVLQQVVLLPEAVHMAVRYT
SIELVGEMSEVVDRNPRFLDPVLNYLMKGLREKALASAAAKAIHNICSVCRDHMAQHFQG
LLDIARSLDSFALSTEAAVGLLKGTAMVLGRLPLDKIAECLGDLCAVQVAALKKLLAEES
SNGRSADPTVCLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNAHQADNRIVE
RCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYRVYPHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCMPTFQLLEQANGLLNHPDTVDDLFRLATRFVQRSPITLLSSSIIVHIIQCA
IAATSLDHRDANCSVMKFVRDLIHTGVANDHTDDFDLRKRLIGQAMEQHGQQLITQLMHS
CCFCLPPYTLPDIAEVLWEVMVFDRPTFCRWLESALKGLPKETSGGAVTVTHKQLTDFHK
QVTSADECKQVCWAIREFTRLFR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaggggggtaaaccgagtctttcgctcgtctaccaggcggtccaggccctgcatcac
gacccggaccctgccgggaaggaacgagcttctatgtggctcggagagctccagagatcg
atgtacgcctgggagatctcagaccagctgctgcagctcaagcaggacgtggagtcgtgc
tactttgccgctcagaccatgaagatgaagatccagacttccttctacgagcttcctcct
gattcgcacggtgctctgcgggactcgctgctctctcacatccagaacctcaaagacctg
tcgcctatcatcgtaacgcagctggcattggccatcgcagaccttgctcttcagatggcg
tcgtggaaaggatgcgtgcacacgctcatcgaaaagtacaacggagaaatcagctccatg
cccttcctcatggagattctgaccgtgctgcccgaagaagtccacagccgctcgcttcgc
atcggagccaatcggaggacagacatcatcgaggacttggcatattactcgtccacggtg
gtcacgctcctggggtcgtgtgtggagaagacgggcagtgatgagaagatgctgatcaag
gtctttcgctgtctggggagctggttcaacctgggagtgctggatagtaacttcatggcc
agcaaccagctgctcatgatcctcttccaagttctgcagagggacgagacctccagcaac
ctgcacgaggcggccgcagactgtgtgtgctcctccctctacgccattgaaaacgtcgac
acaaacatgagcttggcgctgcagctattccagggcgtcctgacgttggagacggcctat
cacatggccgtggcccgcgaggaccttgacaaagtcctgaattattgcagaatcttcact
gagctgtgtgaaacctttttggagacgacggtcaggagtccgggtagaggaatgggagac
ttgaggacgctggagctgctgttgatctgcgccggacacccgcagtacgaggtggtggaa
atctcctttaatttttggtaccggctgggtgaaaatctctacaagatcaacgacgtggcc
ctgaatggcgttttccgaccctacattcagagactactgcactgtttggcccgacattgt
cagctggacccagaccatgaaggaattccggaggagacggacgattttggggagttccgg
atgagagtgtctgacctggttaaagacgtgatatttctggtgggctctatggagtgtttc
tctcagttgtattccacactcaaagatgggaacccgccttgggtggtgaccgaagcggtt
ctcttcataatggccgccattgccaaaagcgtcgaccctgagaacaacccgaccctgttg
gaggtgttgcagcaggtggtgttgctgccagaggctgttcacatggcggtgcgctacacc
agcatcgagctggtcggcgagatgagcgaggtggtggacaggaacccccgattcctcgac
cccgtgctcaactacctgatgaaaggcctgcgagagaaagctctggcctcggccgcggcc
aaggccatccacaacatctgctccgtatgcagggaccacatggcgcagcacttccaagga
cttctggacatcgctcgctcgctggactcctttgccctgtccacggaagccgccgtggga
ctgcttaagggtacggcgatggtcctgggtcgtctgcctctggacaagatcgccgagtgc
ttaggcgacttgtgcgccgttcaggtggcggcccttaaaaagcttttggccgaggaatcg
agcaacggtcgatcggccgatcccaccgtctgcctcgacagactggccgtcattttcaga
cacaccaaccccatcgtggagaacgggcagacgcacccgtgtcagaaggtcatccaggag
atctggcccgtgctgtcggagacgctcaacgctcaccaggccgacaaccgaattgtggag
cgatgctgccgctgcctccgctttgccgtacgctgtgtgggaaaaggttccgcctcctta
ctgcagccgctggtgactcagatggtgagcgtctaccgcgtctacccgcactcgtgcttc
ttgtacctgggcagcatcctggtggacgagtacggaatggaggagggctgtcgccagggg
ctgctggacatgttgcaggctttgtgcatgcccacctttcagctgttggagcaggccaac
ggccttctcaaccatcccgacaccgttgacgacctcttcagactggcgaccaggtttgtg
cagcgtagtcccatcacgctgcttagcagcagcattattgtgcacatcatccagtgcgcc
atcgccgccacctcgctggaccaccgggacgccaactgcagcgtcatgaagtttgtgcga
gacctcatccataccggcgtggccaatgaccacacggacgactttgacttgaggaagcga
ctgatcggtcaggccatggagcagcacggccagcaactgatcacgcaactcatgcattcg
tgttgcttctgtctgccgccgtacaccctgcccgacatcgccgaggtcttgtgggaggtc
atggtgttcgaccggccgaccttctgccgctggttagagagcgctctgaaaggcttgccc
aaggagacgtcaggaggagcggtcacggtgacccacaaacagctgaccgatttccacaaa
caagtcaccagtgctgatgaatgtaaacaagtttgttgggccatcagagagttcacgaga
ctattccggtaa
DBGET
integrated database retrieval system