Syngnathus scovelli (Gulf pipefish): 125992484
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Entry
125992484 CDS
T08785
Symbol
ppfia2
Name
(RefSeq) liprin-alpha-2 isoform X1
KO
K26226
liprin-alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125992484 (ppfia2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125992484 (ppfia2)
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125992484 (ppfia2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
125992484
NCBI-ProteinID:
XP_049617518
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All DBs
Position
22:complement(1174673..1193653)
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AA seq
1248 aa
AA seq
DB search
MMCEVMPTISEDTALSQRGSQSSSSDPDSHFEQLMVNMLDERDRLLDTLRETQESLALSQ
QHLQDVVYDRDSLQRQLSSALPQEFAALTKELNACREQLLEKEEEISELKAERNNTRLLL
EHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVS
LERVSALEEELTAANQEIVALREQNAHIQRKVASGEAADDIPEGGETQHKVHSKRLSNGA
LESAPREAGQVVELQDLLEKQNYELAQMKERMSSLSSRVSEVEQELETARKDLIKSEEMN
NKYQRDIKEAMCQKEDMEERIVTLEKRYLSAQRESTSVHDINDKLENELANKEAFLRQME
EKNRQLQERLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEC
QLEEKNQELLRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNLLIQ
DSEGYRKQYEESIHEKTHLAEEIEKLRSELDQFRLRVGSLTEPTLSRSHLDTSGELRFSL
GSLAETQSDHYRSAKVIRRPRRGRVGLRETKAKSLGEQEWRSQQLGVVGGGGGHHFESDT
EMSDMDDDDRETLFSSMDLLSPGGHSDAQTLAMMLQEQLDAINKEIRLIQEEKESTELRA
EEIESRVASVSLEGLNLARMHHHHHHHHGASITASATASSLASSSPPSGHSTPKLDPRSP
ARDMERMGVMTLPSDLRKHRRKIAAVEEDGREDKATIKCETSPPATPRTVRMTHTLPASS
HNDARGLSSLEAEGTTSSVASSQDSLHKQPKKKGIKSSIGRLFGKKEKGRMGHMAHMAHR
HVMLDPQATAMDADVAGQEAGLSKLGTQAEKDRRLRKKHELLEEARRKGLPFAQWDGPTV
VAWLELWLGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVS
LTSPSAPPTSRTPSGNVWVTHEEMETMAAPSKTKSQSEEGSWAQTLAYGDMNHEWIGNEW
LPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKKLNYDR
KELERRRETSQHEMRDVLVWSNERVVRWVQSIGLRDYAAILHESGVHGALVALDDNFDYS
SLALLLQIPMQNTQARQILEREYNNLLALGTDRRLDECDDKDFRGASWRRQFPPRDVHGI
SMMPGSAETLPAGFRLTTTSGHSRRLPPDVGASTVQRLDSSTVRTYSC
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagcgaggacacggcgctgagccagcgcggctcg
cagagcagctcgtcggacccggactcgcactttgagcagctgatggtcaacatgttggac
gagcgagaccgcctgctggacacgctgagggagacgcaggagagcctggctctgtcccag
cagcacctgcaggacgtggtctacgaccgggactcgctgcagaggcagctcagctccgcc
ctgccccaggagtttgccgctctcaccaaggagctcaacgcctgccgggagcagctgctg
gagaaggaagaggagatctcggagctgaaggccgagaggaacaacaccaggttgctgttg
gagcatctggaatgtttggtgtcccgacacgagcgctcgctgcgcatgacggtggtcaag
aggcaggcgcagtccccctcgggggtctccagcgaggtggaggtcctcaaggccctcaag
tccttgttcgaacaccacaaagctctcgacgagaaggtgcgagagcgactgcgggtgtcg
ctggagagggtgtccgccttggaggaggagcttacggcagccaatcaggagatcgtggcc
ttacgcgagcagaatgctcacatccagaggaaggtggcgtcgggcgaggccgccgacgac
atcccggagggcggcgagacacagcacaaagtccacagcaagcgcctgtccaacggggcg
ctggagtcggcgccgcgcgaagccggccaagtggtggagctgcaggacctgctggagaag
cagaactacgagctggcccagatgaaggagcgcatgtcctcgctgtcgtcgcgcgtctcc
gaggtggagcaggagctggagacggcccgtaaggacctcatcaagtccgaggagatgaac
aacaagtaccagcgggacatcaaagaggcaatgtgccagaaagaggacatggaggagcgt
atcgtgacgctggagaagcgctacctgagcgcccaacgcgagtccacttcggtgcacgac
atcaacgacaagttggagaacgagctggccaacaaggaggccttcctcaggcagatggag
gagaagaaccggcagctgcaagagaggctggagctggccgagcagaagctccagcagacc
atgcgcaaggccgagacgctgcccgaggtggaggccgagctggcccagaggatcgccgcg
ctcactaaggcggaagaacgtcacggcaacatcgaagagcgcatgcgccacttggaatgc
cagctggaggagaaaaaccaggagctgctccgggctcgccagcgagagaagatgaacgag
gagcacaacaagcgtctgtcggacacggtggaccgcctcctcaccgagtccaacgagcgc
ctgcagctgcacctgaaggagcgcatggccgcgttggaggagaagaatttactcatccag
gactcggagggctacaggaagcagtatgaggagtccatacacgagaagacgcatttggct
gaggagattgagaagctgcggtcagaattggaccagttcaggttgagggtgggatccctc
acagagcccaccctgtcacggtctcacctcgacacttcgggcgagctccgtttctccctg
ggctctctggccgagacccagtcggaccactaccgctcggccaaggtcatacggaggccc
aggcgaggtcgagtgggcctgcgggaaaccaaggccaagtctctgggcgagcaagagtgg
cgctcgcagcagctgggcgtggtgggcggcggcggcggccaccattttgagagcgacacg
gagatgtccgacatggacgacgacgaccgggagacgctcttcagctccatggacctcctc
tcgcccggcggacactctgacgcgcaaaccttagccatgatgcttcaggagcagctggac
gccatcaacaaggagatccggctgatccaggaggagaaggagtcgacggagctgcgtgcc
gaggagatcgagagccgcgtggccagcgtcagcctggagggcctgaacctggcacgcatg
caccaccaccaccatcaccaccacggggcctccatcaccgcctcggccaccgcctcctcc
ctggcgtcctcgtcgccgcccagcggccactccacgcccaagctggacccccgcagcccc
gcccgggacatggagcgcatgggggtcatgacgctgcccagcgatttgcggaagcaccgg
cgaaagatcgccgcggtggaagaggacgggcgcgaggacaaggccaccatcaagtgcgag
acctcgccgcccgccacgccacgcaccgtccggatgactcacaccctgccggcgtcctcg
cacaacgacgccagagggttgtcctccctggaagcggaaggcaccaccagcagcgtggcc
agcagccaggactcgctgcacaagcagcccaagaagaaaggcatcaagtcgtccatcggc
cgcctcttcggcaagaaggagaaaggccgcatggggcacatggcgcacatggcgcaccgc
cacgtcatgctggatccgcaagccaccgccatggacgccgacgtggcgggccaggaggcg
gggctgagcaagctgggcacgcaggccgagaaggaccgccgcctgagaaagaaacacgag
cttctggaggaggccaggaggaagggcttgcctttcgcgcagtgggacggacccaccgtg
gtggcctggctggagctgtggctggggatgccggcgtggtacgtggcggcctgccgcgcc
aacgtgaagagcggcgccatcatgtcggcgctgtccgacacggagatccagcgtgagatc
ggcatcagcaaccccctgcacagactcaaactccggctggccatccaggagatggtctcg
ctcaccagcccgtcggcgccccctacctccagaaccccgtcaggcaacgtatgggtgacc
cacgaggagatggagaccatggcggccccttccaaaacgaaatcccagtctgaagagggg
agctgggcacaaacgctggcttacggcgacatgaaccacgagtggatcggcaacgagtgg
ctgcccagtctcggactacctcagtaccgcagctacttcatggagtgcctggtggatgcg
cgcatgctggaccacctcaccaagaaggacctgagggtgcatctcaaaatggtggacagc
ttccacagaacaagtttacaatacggcatcatgtgtctgaagaagctcaactatgaccgg
aaggagctggaacggcggcgggagacgagccagcacgaaatgcgagacgtgctggtgtgg
agcaacgagcgggtggtgcgctgggtgcagagtatcggcctgcgcgactacgccgccatc
ctgcacgagagcggcgtgcacggagcgctggtcgccctggacgacaactttgattacagc
agcctggccctgctcctccagatccccatgcaaaacactcaggcccgtcagattctggag
cgcgagtacaataacctgctggcgctgggcaccgaccggcggctggacgagtgcgacgac
aaggacttccgaggggcgtcgtggcggcggcagttcccgccgcgggacgtgcacggcatc
agcatgatgcccggatcggccgagacgcttccggccggcttccgtctgaccaccacgtcg
ggacactcgcgcaggctcccgcccgacgtgggcgcctcgacggttcagcgcctggacagc
tccacggtgagaacctactcgtgctga
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