Syngnathus scovelli (Gulf pipefish): 125992518
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Entry
125992518 CDS
T08785
Symbol
atp2b1a
Name
(RefSeq) plasma membrane calcium-transporting ATPase 1 isoform X1
KO
K05850
P-type Ca2+ transporter type 2B [EC:
7.2.2.10
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04020
Calcium signaling pathway
sscv04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125992518 (atp2b1a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
125992518 (atp2b1a)
Enzymes [BR:
sscv01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
125992518 (atp2b1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cation_ATPase_C
Cation_ATPase
ATP_Ca_trans_C
E1-E2_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
Phage_tail_tube_init
SDA1_dom
Motif
Other DBs
NCBI-GeneID:
125992518
NCBI-ProteinID:
XP_049617586
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Position
22:complement(5378633..5401689)
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AA seq
1251 aa
AA seq
DB search
MANNSYSGVKNSIVEANHDGDFGCTLKELRSLMELRGAEGLSKIGECYGDVHGLCSRLKT
SPTDGLSGQPADIEKRKTVFGQNLIPPKKPKTFLQLVWEALQDVTLIILEVAAIISLGLS
FYRPQDAEREDCGKAAGGGDDEHEAEAGWIEGAAILLSVICVVVVTAFNDWSKEKQFRGL
QNRIEQEQKFTVVRGGQVIQIPVAEIVVGDVAQIKYGDLLPADGLLIQGNDLKIDESSLT
GESDHVKKTHDRDLMLLSGTHVMEGSGKMVVTAVGVNSQTGIIFTLLGAAEDEDDDDDDD
DEKKEKEDKKKQKKNKKQDGSIENRKKAKAQDGAAMEMQPLNSDEGADAEEKKKSTLPKK
EKSVLQGKLTKLAVQIGKAGLVMSAITVIILVVLFVVDTFWIQNLPWVKACTPIYIQFFV
KFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKT
GTLTMNRMTVVQAYVAEKHYKHVPEPESIPASVLDFLILGIAVNCAYTTKIMPPEKEGGL
PRQVGNKTECALLGFSTDLKRDYQTIRNEIPEEKLYKVYTFNSVRKSMSTVLKMADGSYR
MFSKGASEILLKKCYKILTASGESKVFRPRDRDDMVKKVIEPMASEGLRTICLAYRDFAV
KDGEPDWDNETDILSGLTCICVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARA
IASKCGILQPGDDFICLEGKEFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLV
KGIIDSTVIEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSS
IVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTF
ASLALATEPPTEALLLRKPYGRNKPLISRTMMKNILGQGVYQLVIIFTLLFAGETMFDID
SGRKAPLRAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFDGIFNNLIFCSIVFGTF
IIQIVIVQFGGKPFSCVALTIDQWLWCTFLGFGSLLWGQVISSIPTSRLKFLKTAGHGTQ
KEEIPDEELEELDDMDEIDHAERELRRGQILWFRGLNRIQTQIRVVNAFRSSISLYEGLE
KPESRSSIHNFMTHPEFRIEDSEPHIPLIDDTDAEDDAPTKRNSASPRNISPAPPSPASA
APPSGSPTLSPASPNQNNNAVESSNHLLPEATKAGETPVPGSPLHSLETSL
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaactcgtacagcggcgtgaagaactccatcgtggaggccaaccacgatggc
gactttggctgcacgctcaaagaactgcgctccctcatggaactgcgaggcgcggagggc
ctaagcaaaataggggaatgttacggagacgttcacggactctgcagccgattaaaaacc
tcacccacggacggtctaagtgggcagccggcagacatcgagaaacggaaaacagtgttt
gggcaaaatttgataccgcccaaaaagcccaaaacattcttgcaattagtgtgggaggcg
ctgcaggatgtcacgctgattatcctggaagtggcagccataatttcacttggcctttct
ttttatagacctcaagatgctgaaagagaagactgcgggaaggccgccggcggcggggac
gacgagcatgaggcggaggcgggctggatcgagggagctgccatcctgctgtcggtcatc
tgcgtggtggtagtgacggcgttcaacgactggagcaaagagaagcagttccgcggcctc
cagaaccgcatcgagcaagagcagaagttcaccgtggtccgcggcgggcaggtcatccag
atccccgttgcggagattgtcgtaggcgacgtcgcacaaataaaatacggggaccttttg
cccgccgatggtctcctcatccaaggcaacgacttgaagatcgacgagagctcgctcacg
ggcgagtcggaccatgtcaagaagacacatgatagagatttaatgctgttatcaggcacc
cacgtgatggagggctcggggaaaatggtggtcacggcggtgggcgtcaactctcaaact
ggaattattttcacgctgctcggcgccgccgaggacgaggatgacgacgacgacgatgac
gacgaaaagaaggaaaaagaggacaagaagaagcagaagaaaaacaaaaagcaggatggc
tccattgaaaaccggaagaaagcaaaagcgcaggatggcgccgccatggaaatgcagccc
ctgaacagtgatgagggagccgatgcagaagagaagaagaaatccactctgcctaaaaaa
gagaaatctgtcctccagggcaagctgaccaaactcgccgtacagatcggcaaagcggga
ttggtgatgtcggccatcaccgtcatcatcctggtggtgctctttgtggtcgacaccttt
tggatccaaaacctcccctgggtcaaggcctgcacgcccatctacatccagttctttgtc
aaattcttcatcatcggcgtcactgtgctggtggtggccgtccccgaaggcctcccgctc
gccgtcaccatctccctggcgtactccgtcaagaaaatgatgaaagacaacaacctggtg
cgtcacctggatgcctgcgagacaatggggaacgccacggccatctgctcagacaagacg
gggacactcaccatgaaccgcatgacggtggtgcaggcctacgtagccgagaaacactac
aagcacgtgccggaaccggagagcatcccggcctccgttttggatttcctcattctgggg
atagccgtcaactgcgcttacacgaccaagatcatgcctccggagaaagaaggcggcctc
cctcggcaagtggggaacaaaaccgaatgtgccttgctgggattttccaccgacctcaag
cgtgactaccagaccattcgcaacgagatcccagaggagaagctgtacaaggtgtacacc
ttcaactcggtgcgcaaatccatgagcaccgtgctgaagatggccgacggcagctaccgg
atgttcagcaagggcgcctcggaaatcctcctcaaaaagtgctataaaatcctgacggcg
tccggcgagtccaaggtgtttcgcccgcgagatcgagacgacatggtgaagaaagtgatc
gagcccatggcctccgaaggactgcggaccatctgccttgcataccgagatttcgccgtg
aaggacggagagcccgactgggacaacgagaccgacatcctctccgggctcacttgcatc
tgcgtggtgggcatcgaagacccagtgaggcctgaggtcccagacgccatcagaaagtgc
cagcgcgccggcatcacggtgcggatggtgacgggcgacaacatcaacacggcgcgcgcc
atcgccagcaagtgcggcatcctacagcccggagatgacttcatctgcttggagggcaaa
gagttcaaccgacggatacgcaatgaaaagggcgagatcgagcaggagcggattgacaaa
atctggcccaaactccgagtgctggctcgttcttccccgaccgacaagcacactttagtc
aaaggtattatcgacagcaccgtgattgagcagaggcaagtcgtggccgtcacgggtgac
ggcaccaacgacggtcccgccttgaagaaagccgacgtcggcttcgccatgggtatcgcc
ggcactgacgtggccaaggaagcgtccgatatcatcctgacggacgacaacttttccagc
atcgtcaaggcggtcatgtgggggcgcaacgtttacgacagcatttccaagttcttgcaa
tttcaactgaccgtcaacgtggtggctgtcatcgtggcgttcacgggcgcctgcatcaca
caggactctccactgaaggcagtgcagatgttgtgggtcaacctgatcatggacactttc
gcctcgctggcgctggccaccgagccgcctacggaagccctgctgctccggaaaccatac
ggccgcaacaagccgctcatctctcgcaccatgatgaagaacatcctgggccagggcgtg
taccagctggtcatcatcttcacgctgctcttcgccggagagaccatgttcgacatcgac
agtggcaggaaggcgccgctccgggcgccgccatcggaacactacaccatcgtcttcaac
acgttcgtcctgatgcagctgttcaatgagatcaatgcccgcaagatccacggcgaacgc
aacgtctttgatggcatcttcaacaacctcattttctgcagcattgtcttcggtaccttc
atcatccagattgtcatcgtgcagtttggagggaagccgttcagctgcgtggctctcacc
atcgaccagtggctctggtgcactttcttgggtttcggctcactgctgtggggacaggtc
atctcgtcgatccccacgagccgcttaaagttcctgaaaacggcgggccacggcacccag
aaggaggagatccccgacgaggagctggaggagctcgacgacatggacgagatcgatcac
gccgagcgggagctccgtcgcggccagatcctttggttccgcggcctcaatcgcatccag
actcagatccgcgtggtgaatgcattccgcagctccatctccctctatgagggcctggag
aagcccgagtcgcggtcctccatccacaacttcatgacccacccagaatttcggatagag
gactctgagccgcacatccccctcatagacgacacggacgccgaggacgacgcgcccacc
aagcgcaactctgccagcccccgcaacatttcgcccgcgccgccctcgccggccagcgcc
gccccgccttccggcagccccaccctcagccccgcctcccccaaccagaacaataacgct
gtagagagcagcaaccacctcctcccggaggccaccaaagcgggcgagacccccgtgccg
ggcagccccttacacagcctggagacctctctttga
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