Syngnathus scovelli (Gulf pipefish): 125992543
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Entry
125992543 CDS
T08785
Symbol
krr1
Name
(RefSeq) KRR1 small subunit processome component homolog
KO
K06961
ribosomal RNA assembly protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sscv03009
]
125992543 (krr1)
Ribosome biogenesis [BR:
sscv03009
]
Eukaryotic type
90S particles
Other 90S particles
125992543 (krr1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_KRR1_2nd
KH_KRR1_1st
KH_1
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
125992543
NCBI-ProteinID:
XP_049617630
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All DBs
Position
22:3819513..3822071
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AA seq
376 aa
AA seq
DB search
MDSVSEAQAGKKSKKEKMPADEADLLTVPDGWKEDPFTKEDNPRGMLEESSFATLFPKYR
EAYLKDCWPLVEKALGETHIKATLDLIEGSMTVCTTKKTYDPYIIIRARDLIKLLARSVP
FEQAVRILQDDVACDIIKIGTLVRNRERFVKRRQRLIGPKGSTLKALELLTNCYVMVQGN
TVSALGPFNGLKEVRKVVMDTMKNIHPIYNIKTLMIKRELSKDPELRVQNWERFLPKFRH
KNLTKRKEPKKKTVKKEYTPFPPPQPDSQVDKELASGEFFLRASVKKMAKMAEIKVKQAQ
ALTKKQEQRKKAFIPPKEKPTVKKTKAPEESKLDIDAIKEKVKKAKTKKLGAPPVIPAPP
VTSSATNKKKKAKSKN
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgtgagtgaagcgcaagctgggaaaaagtccaaaaaggaaaaaatgccggcg
gatgaagccgatctgctgactgttcccgatggctggaaagaggacccctttaccaaagaa
gacaacccccgcggtatgttggaggagagcagctttgccaccctcttccctaaatacaga
gaggcctatctgaaagattgctggccattggtggagaaggctttgggagaaacgcatatt
aaagccaccctcgacctgattgagggaagcatgacggtctgcaccactaaaaaaacctat
gacccatacatcatcatcagagccagggatctcatcaagctgcttgccagaagcgttcca
tttgaacaggctgtacggatattacaggacgatgtggcgtgtgacatcatcaaaatcggg
accttggtgaggaacagggaacggtttgtgaagcggagacagcgtcttattggcccgaaa
ggttccaccttgaaagctttagaactgctgaccaactgctatgtgatggttcagggcaac
actgtgtcagccctgggacccttcaatggactaaaagaggtgcgcaaagttgtcatggac
acgatgaaaaacatccatccaatctacaacataaagacgctgatgatcaaacgggaactg
tccaaagaccccgaactccgcgtgcagaattgggaacgcttccttcctaagttccgacac
aagaacttgacaaagcggaaggaacccaagaagaagactgtgaagaaggagtacactccc
ttcccgccaccacagccagacagccaggtggacaaggaattggcttcgggtgaattcttc
ctgcgagcaagtgtgaagaagatggcgaagatggcagagataaaggtgaagcaagctcaa
gccctgaccaagaagcaggagcagaggaaaaaagcttttattcctcctaaggagaaaccc
acagtgaagaaaactaaagcacccgaggaaagtaagctggacattgatgccattaaggaa
aaagtaaaaaaggccaaaaccaagaagctgggtgctccaccagtgatcccagctccgccc
gtcaccagctccgccacaaacaaaaaaaagaaagcaaagagcaaaaactga
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