Syngnathus scovelli (Gulf pipefish): 125992577
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Entry
125992577 CDS
T08785
Name
(RefSeq) eukaryotic initiation factor 4A-I
KO
K03257
translation initiation factor 4A
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125992577
03012 Translation factors [BR:
sscv03012
]
125992577
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125992577
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125992577
mRNA cycle factors
Stress granule specific factors
125992577
Translation factors [BR:
sscv03012
]
Eukaryotic type
Initiation factors
eIF-4
125992577
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125992577
Exosomal proteins of bladder cancer cells
125992577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
UvrD-helicase
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
125992577
NCBI-ProteinID:
XP_049617666
LinkDB
All DBs
Position
1:complement(25092653..25097672)
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AA seq
404 aa
AA seq
DB search
MSANNDDRDNGPEGMEPEGIIESNWNEIVDSFDDMNLREELLRGIYAYGFEKPSAIQQRA
ILPCIKGYDVIAQAQSGTGKTATFAISILQQIDVTLKGTQALVLAPTRELAQQIQKVVLS
LGDYMGASCHACIGGTNIRNEAQKLQAEAPHIVVGTPGRVFDMLNRRNIAPKTIKMFVLD
EADEMLSRGFKDQIYEIFRKLNETIQVVLLSATMPADVLEVTKKFMREPIRILVKKEELT
LEGIRQFYVNVEKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMQSRDFTVSAM
HGDMDQKERDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGR
GGRFGRKGVAINMVTHDDKRILRDIETFYNTTIEEMPMNVADLF
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaaacaacgatgatagagacaatggccccgaaggtatggagccggaaggcatc
attgagagtaactggaacgaaattgtggacagttttgatgatatgaacctgcgtgaagag
ttgctccgtggaatttatgcctacggtttcgagaagccgtctgccatccaacagagagct
attcttccttgtatcaagggttatgacgtgattgcccaggctcagtctggcactggaaag
actgccacttttgcaatttctatcctccagcagattgatgtgacgctgaaaggcacccag
gctttggtcttggcccccacaagggagctggctcaacagatccagaaagtggtgctgtct
ctgggtgactacatgggcgcctcttgccatgcttgtatcggtggaaccaacatccgcaac
gaggcccagaagctgcaggccgaagcccctcacattgtggtggggacccccggccgtgtc
tttgacatgttgaaccgtaggaacattgcgcctaaaaccatcaaaatgtttgttctggat
gaggctgatgagatgctgagccgaggcttcaaggaccagatctacgagatcttccggaaa
ctgaatgagaccatccaggttgtcctactttcagccaccatgccggctgacgtgttggag
gtcaccaagaaattcatgcgtgagcctattcgcatcctggtcaaaaaagaggagctgacc
cttgagggtatccgccagttctacgtcaatgtggaaaaggaggagtggaagctagacact
ctctgcgatctgtacgagaccctgaccatcacccaggccgtcatcttcatcaacacaagg
aggaaagtggactggctcactgagaagatgcagtccagggacttcaccgtttcagccatg
catggtgacatggaccagaaagagcgcgacttgatcatgagggagttccgctccggctcc
agtagagtcctcatcaccactgacctgctggctcgtggcatcgatgtgcaacaggtctct
ctcgtcatcaactacgaccttccgaccaacagggaaaactacatccacaggattggtcgc
ggcggtcgttttggcagaaagggagtcgccatcaacatggtaacccatgacgacaagcgt
atcctgcgggacatcgagacgttctacaacaccaccatcgaggagatgccaatgaatgtg
gctgatcttttctaa
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