Syngnathus scovelli (Gulf pipefish): 125992750
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Entry
125992750 CDS
T08785
Name
(RefSeq) transcription factor Sox-19a
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125992750
Transcription factors [BR:
sscv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125992750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125992750
NCBI-ProteinID:
XP_049617756
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All DBs
Position
1:complement(25086553..25089946)
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AA seq
305 aa
AA seq
DB search
MYSMMEHELKPGGQPVHHAAQGMSPVPPGSMTPGNGVPHPGSKSALQAPGGGDPMDKVKR
PMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSDAEKRPFIDEAKRLRAVHMK
EYPDYKYKPRRKSKPALKKDAVQVPKYPLAAGNLLVTAQGQGASPRMESYGWGPAGGYAG
MQGEALGYTQQLHRYDLSALQYPPAMTAAQTYMNGNNSYSPMSYSSSPQQPSPVPMSMVK
AEAVSHSPPTPTHHRGPLQGDLRDMISMYIPGGGDGGDPAGGAAPRGYGGVQQHYLTGTV
PLTHI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtatgatggaacacgagttgaagcccggcgggcagccggtgcaccacgcagcg
caaggcatgtcaccggtccctccgggcagcatgaccccgggcaacggcgtgcctcacccg
ggctccaaaagcgccctccaggctcccggcggaggtgaccccatggataaggtcaagcgg
cccatgaacgccttcatggtgtggtctcgcggtcagaggcgcaaaatggcccaagagaac
cccaaaatgcacaactccgagatcagcaagcggctgggagccgagtggaagctgctgagc
gacgccgagaagcggccgttcatcgacgaggccaagcggctgcgggccgtgcacatgaag
gagtacccggactacaagtacaagccccggcgcaagagtaagccggcgctcaagaaggac
gcggtgcaagtgcccaagtacccgctggccgcgggcaacctgctggtgactgcgcaaggc
cagggcgccagcccaaggatggagagctacggatggggccccgcgggtggctacgccggg
atgcagggcgaagcgctcggctacacgcagcagctgcaccgctacgacctgtcggccctc
cagtacccccccgccatgaccgccgctcagacttacatgaacggaaacaactcgtacagc
ccgatgtcgtacagcagcagcccccagcagcccagcccggtccccatgtccatggtgaaa
gcggaagccgtgtctcactcccccccgacgcccacccaccaccgggggcccctgcagggc
gacctgcgggacatgatcagcatgtacatcccggggggcggcgacggcggcgacccggca
gggggagccgctcccaggggctacggcggcgtccagcagcactacctcaccggcactgta
cccctaacacacatctag
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