Syngnathus scovelli (Gulf pipefish): 125993445
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Entry
125993445 CDS
T08785
Symbol
hdx
Name
(RefSeq) highly divergent homeobox
KO
K24884
highly divergent homeobox
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125993445 (hdx)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
125993445 (hdx)
SSDB
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Paralog
GFIT
Motif
Pfam:
Homeodomain
Pyocin_S
Motif
Other DBs
NCBI-GeneID:
125993445
NCBI-ProteinID:
XP_049617971
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All DBs
Position
1:17862440..17871264
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AA seq
759 aa
AA seq
DB search
MAAPFPSNSSMDSWPHRRGLQAMNLRSVFTVEQQMILERYYDNGMTNQSKACFQLILQCA
QEAKLDFSVVRTWVGNKRRKLASKGDQNGGMSHSLPSHGLAGGLLSNHPLAHGAMSNHGL
SAATLLPAELAAVRNIHNRAHLLPTSSASASSPSSLSTGNNNNNDVLHTSLYSQNSNPRS
RPKPTGPIQSETELSALPPCSLVSQAMQSRTNSNSSSLHSKLVSLSQNLPSLTSSSASLV
YTAGRDMKSSVPVRDVGLTAGVGSLPPNWTRTFGTAQTQTWSSSPQSQALLQPRSETNPQ
PPPHKTRLSLSLQNSSPTSEHTPCSQQVFTYADRSEGSRIKAGLGCTLRAQEMQRPVLRT
LDTSHNISIAMETADEEDEWQREEELANMAAQNNMHQEQTMSLLKGSPALTMAHSQNLLL
KNNSTHQGSYSFTHTSLSGDDSSQTSVSAATWVVSNSRKRTLQDRTQFSDGDIVQLKRFW
ERGMTSLGSVCKEKITAAANQLNVDTEIVKTWISNRRRKFRLMGIEIPPPKGGPAVFTNT
NSPRGDSPVAFSPEEDCLGTPDLGDDLNDGVSLCLSEDSTIDSHQRDENGTNVTGSTLLA
NNVKVEVIDGDEEEDCDEGEMMPLDLEQMQSLLEFKHEEVQFLENELENQKQKYLDLASF
TKRLLCAVRSKDAEKQQELIASLPQLSDQVWDMTKDRGTLPDVVSEEKSSNHCITMTSGV
EHTQDLANKGSPLRNIKDNKVTEPSASEEKMQGVQENGQ
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcctttcccctccaacagcagcatggattcatggccacacagacgtggcctg
caggctatgaacctgcggtcggtattcacagtggaacagcagatgatcctggagcgttac
tatgataatggaatgaccaatcaaagcaaggcttgcttccagctaatactgcaatgtgct
caggaggccaaactagacttcagtgttgtccggacatgggtcggtaacaaaagaaggaaa
cttgcctccaagggagaccaaaatggaggcatgtctcattccttaccgagtcatggactt
gctgggggactgttgtccaatcatccgctggctcatggagctatgtccaatcatggtctc
tctgcagcaacattgctcccagctgaacttgctgccgtgcggaatatacataatcgcgca
caccttctccccacatcctctgcctctgcttcttctccctcttctctgagcactgggaac
aacaataataatgacgtccttcacacaagtctctactcccagaactccaaccctcgctct
cggccaaaacccacaggccccatacagtcagagactgagctctcagcactccctccttgc
tccttagtcagccaggctatgcagagcagaaccaacagtaactcctcatctcttcactcc
aagcttgtgtcactctctcagaatttgccttccctcacgtcttcttctgcatctctggtc
tatactgctggaagggacatgaaatcaagtgtgcccgtcagggacgtaggattgactgca
ggggtaggaagcctacctcccaactggactcgaacatttggtactgcacagactcagaca
tggtcctcttcccctcagtcccaggctctgcttcagcccagatctgagaccaatccgcaa
ccaccaccacacaagacccgtctgtccctttctctccaaaactcaagtcctacctcagag
cacacaccctgctcccagcaggtgttcacttatgcggacaggagtgagggcagcagaatt
aaggctggactaggttgtactttaagagcccaggagatgcagaggccagttttacgcact
ttggataccagtcataacatctccattgccatggaaaccgcagatgaagaagatgagtgg
cagagggaagaagaactggccaatatggctgctcagaataacatgcaccaggagcagacg
atgtcgttgctaaaagggagccctgctttgaccatggcccactcccaaaatctgctgctc
aagaacaactcaactcatcagggcagctactccttcacacatacctcgctgtctggggat
gacagctctcagacttcagtcagtgccgccacttgggttgtcagcaactccagaaaaaga
acattgcaggatcgcacccaattcagcgatggggatatcgttcaactgaaacgcttctgg
gaaaggggcatgaccagcctgggctcagtgtgcaaggaaaagatcactgccgcagcaaac
cagctcaatgtagacactgaaatcgttaagacatggatcagcaacagacgaaggaagttc
cgtctcatgggtattgaaataccaccgcctaaaggtgggcctgctgtattcacaaacacg
aactcccccagaggtgactctccggtggcgtttagccctgaagaagattgcctcggaaca
cccgacctaggagatgacttgaatgatggggtatctctctgcctctctgaagatagcacc
attgactcacaccagagagatgaaaatggaacaaatgtgactggttctacgctgctggct
aataatgtgaaagttgaagtgattgatggggatgaagaggaagactgcgacgagggggaa
atgatgcccttagatttagagcagatgcaaagcctacttgaattcaagcatgaggaagtt
cagttcttggagaatgagctagagaaccaaaaacaaaaatacctggaccttgcaagcttc
accaagaggctgctttgtgctgtgagaagtaaagatgcggagaaacagcaggaactcatc
gccagtctacctcagctttcggaccaggtgtgggacatgaccaaggacagaggaacattg
cctgatgttgtgtctgaagaaaagtcctccaaccattgtattaccatgacaagtggtgtt
gaacacacacaggacctggcaaataaaggctccccattgaggaacattaaagacaataaa
gttaccgagccctctgcatcagaggagaaaatgcaaggagtgcaagaaaatggccaatga
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