Syngnathus scovelli (Gulf pipefish): 125993508
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Entry
125993508 CDS
T08785
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03030
DNA replication
sscv03410
Base excision repair
sscv03420
Nucleotide excision repair
sscv03430
Mismatch repair
sscv04110
Cell cycle
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125993508 (pcna)
03410 Base excision repair
125993508 (pcna)
03420 Nucleotide excision repair
125993508 (pcna)
03430 Mismatch repair
125993508 (pcna)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125993508 (pcna)
09144 Cellular community - eukaryotes
04530 Tight junction
125993508 (pcna)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sscv03032
]
125993508 (pcna)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125993508 (pcna)
DNA replication proteins [BR:
sscv03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
125993508 (pcna)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
125993508 (pcna)
MMR (mismatch excision repair)
Other MMR factors
125993508 (pcna)
TLS (translesion DNA synthesis) factors
Other TLS factors
125993508 (pcna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
AMA-1
Motif
Other DBs
NCBI-GeneID:
125993508
NCBI-ProteinID:
XP_049618038
LinkDB
All DBs
Position
3:complement(19641061..19643618)
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AA seq
260 aa
AA seq
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MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRSDGFDSY
RCDRNLAMGVNLGSMSKILKCAGNEDIITVRADDNADTLALVFETVNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVIKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNI
KLSQTSNVDKEEEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHVKYYLAPKIDEESS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggctcgcttggtccagggatccatcttgaagaaggtgctggaggccttgaag
gatctgatcactgaggcgtgctgggacgtcagctcgtccggcatctcgctgcagagcatg
gactcctctcacgtctccctggtgcagcttaccctccgcagtgacggcttcgactcgtac
cgctgcgacagaaacctcgccatgggagtcaacctgggcagtatgtccaagatcctgaag
tgcgccggaaatgaagacatcatcaccgttcgagcggacgacaatgcagacacactcgcg
cttgtcttcgagacagtcaaccaggagaaggtgtcagattatgagatgaagttgatggac
ctcgatgtggagcagctgggaattccagagcaggagtacagctgtgtgatcaagatgcca
tcaggggagttcgcccgcatctgccgcgatctctcgcagattggagacgccgtcatgatc
tcctgcgccaaggatggcgtcaagttctctgctagtggagagctgggtacgggaaacatc
aagctgtcccagacaagcaatgtggacaaggaggaggaggcggtgactattgagatgaat
gaaccagttcagctcatctttgctctcaactacttgaacttcttcaccaaagccactccc
ctgtccaagacagtcaccctcagtatgtcagcggacattcctcttgtggtggaatataag
attgctgacatgggccacgtcaaatactacctggcgcctaagatcgacgaagagtcttct
tga
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