Syngnathus scovelli (Gulf pipefish): 125993517
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Entry
125993517 CDS
T08785
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125993517 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125993517 (ube3b)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125993517 (ube3b)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
HECT type E3
125993517 (ube3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
M16C_assoc
DUF7462
Motif
Other DBs
NCBI-GeneID:
125993517
NCBI-ProteinID:
XP_049618059
LinkDB
All DBs
Position
3:complement(16796381..16806091)
Genome browser
AA seq
1067 aa
AA seq
DB search
MFGAPQSSKSEFLDKARQAREERKGQKEKERAAILIQALVRRFLCRSRLQKQIRKDVDDY
FESSAATTKRNALSIFKIARKLLFIYHLEDKMRFEKLCRAILASMEVENEPKVWYVSLAL
SKDLTIPWLKQIKDVLWTCCQLLKNLKPDIMQDNKLVTLYLTMLVTFTDTSTWRIVRGKG
EALRPALMRICENIMGHLNQKGFYSTLQILLTNGLARSKPALSKGTLTAIFTLSLRPVIA
AHFSDNLLRSFLIHVMSVPAVTSHLCKLTPECITSIQTHGLLKKFILLLSREEQCSDICV
CLEGSHTLCLLGNLIHLGFLNERIIEEETNRFVKDLTDMLSYCQRYVSQKKSNLTHWHPV
LGWFSQIVDYGLNESMPLVTKQLQHLWGVPVIRTLFSDVLSKKLESQELSPAPAQPSTSQ
NNLPVKSLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTALSTLTQIRLQI
LTGLTHLDDLLPKLWAFICELGPQGGLKLFMECLNNDTEESKRLLAMLMLFCDCSRHLIT
ILDDIEVYEEQTSFKIEELITISSFLNTFVYKMIWDGILENAKGEKLELFHSVHGWLMVL
YERDCRRKFTFDDHWLRKDLKPSLLFQELEKGKKRAQLILQYIPHVIPHKNRVLLFRNIV
TKEKENLGLIETNSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGVD
EAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFVGKM
LGKAIYEGIVVDVPFASFFLSQVLGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDVG
DLGLSLSYDEDVMGQLVCHELIPGGKTMPVTNENKFSYIHLMAHFRMHTQIKEQTAAFIR
GFRSIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDILS
SDFTAEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTI
RKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcaccccaaagctcgaagtctgaattcctggataaagccaggcaagccagg
gaggagaggaaagggcagaaggagaaagagagagcagcaatcctcatccaagccctggtc
agacgatttttatgtcgcagcagactccagaaacaaataaggaaagatgttgatgactat
tttgagtcttcagctgcaacaacaaaaagaaatgcactttcaatttttaaaattgctcgt
aaattactattcatttaccacttggaggataagatgaggtttgaaaagctctgtcgggct
attcttgccagcatggaagttgaaaacgagcctaaagtctggtatgtgtctttggcactc
tccaaagatcttacaatcccttggttgaaacaaattaaagatgttctgtggacctgctgt
caactactaaagaacttaaagcctgatattatgcaggacaacaaattggtaacgctttac
ctcaccatgctggtcactttcacagacacatcaacatggcggattgtgagagggaaagga
gaagctctccgacctgctttgatgagaatctgtgagaatatcatgggtcatctcaatcaa
aagggattctattcaacactacagattttgctgaccaatggcttggctcgttcgaaacca
gctctctcaaaaggcactttaacagctatatttactttgtcactaagaccagtcatcgct
gctcacttctcagacaacctgctcagatcattcctcattcacgttatgtcagttccagct
gtgacttcgcacctgtgtaagctcaccccagagtgtattacgtcgatccagactcatggc
cttctaaagaagtttatccttcttctcagccgtgaggagcagtgttctgatatctgtgtg
tgtctcgaggggagccacacactctgcttattaggtaacctgattcacttgggcttcctg
aatgagcgaatcatagaggaggagaccaatcgctttgtgaaggacctgactgacatgctg
tcctactgccagagatatgtgtcccaaaagaagtccaacctcacccactggcacccagtc
ctgggctggttctcccaaattgtagattatggtcttaacgaatcaatgccactggtcacc
aagcaactgcagcatctgtggggcgtgcctgtcattcggaccctcttcagtgacgtcctc
tcgaagaagctcgagagtcaggagctcagtcccgcacctgcacaacctagcacatcgcaa
aataacctgccagttaaaagcctgtttaagcgagcttttcagaagtccgcgtctgtacga
aacatcttgaagccggtcgggggaaagcgggtggactctgccgaagttcagaaggtgtgc
agcatttgtgtgctctaccaaactgctctttccacactgacgcaaatacgactacagatt
ctcaccggtctgacgcacctcgatgacctcctgcccaagttgtgggcttttatctgtgaa
ttgggcccacagggaggcctcaagctttttatggagtgtctcaacaatgacactgaagag
tccaagcggctcctggctatgctcatgctcttctgtgactgttcacggcacctcatcaca
attctggatgacatcgaagtctacgaagaacagacctcctttaaaatagaggagctcatc
actatctcctcgtttcttaacacttttgtgtacaaaatgatatgggacggtatcctcgag
aacgcaaagggggagaaactggagttattccacagcgttcacggatggttaatggtgctt
tacgaacgtgattgccggagaaaattcacctttgatgaccactggttacgcaaagactta
aaaccaagcctgcttttccaagaacttgagaaaggcaagaagcgagcccagctgatactg
caatatatcccacatgttattcctcataaaaatagggtgctgctgtttcggaatatcgtc
actaaggaaaaagagaatcttggcttaatagaaaccaactccgcctcgccgcacgtcacg
cacattaccattcgccgctcacgcatgttagaggatggctacgaccagctccgccgttta
cctgtgaattccataaaaggcgtcattcgtgtgaagtttgtgaatgacctgggagtggat
gaagcgggtatcgatcaagatggtgtgtttaaagagtttcttgaagagatcattaagaaa
gtgttcaaccctgcactcaacctattcaagaccacgagtggaaatgagaggctttatcct
tcgcctacttcctacatccacgagaaccatctgcagctatttgagtttgtggggaagatg
ttagggaaagccatttatgagggcattgtggtggatgttccttttgcttccttcttcctc
agccaagttttgggtcatcaccacagcactttttacagctccattgatgagctgccctca
ttggactcagagttttacaagaacctcacctccattaagcgctatgatggagatgtggga
gacctgggactttctttatcctatgacgaagatgttatgggacagcttgtttgtcacgag
ttgatacctggaggcaagaccatgccagtcaccaatgaaaataagttcagctacatccac
ctcatggctcacttccggatgcacactcagattaaggagcaaacggcagctttcatccga
ggctttcgcagcatcattaacccagaatggttgcacatgttttccacacccgaggttcag
cgtctagtctcgggagacaatgctgaaattgacttggatgacctcaagaagcacaccgtc
tactacggaggttttcatagcagccatcgtgttatcatctggctgtgggacatcttgtcc
agtgatttcacggctgaggagagggcaatgttcctcaaatttgttaccagctgctcaagg
cctcctctcctaggttttgcctacctcaagccacctttttcaatccgttgtgtggaagtg
tcagatgatcaggacacgggggacactcttggcagcgtgctccgaggcttcttcacaatc
cgtaaaaaggagcctggtggtagactgcccacttcttccacatgcttcaacctgctcaaa
ctccccaactacagcaaaaagagcatcttgcgtgacaagctacgctacgccatcagtatg
aacaccggctttgagctttcgtaa
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