Syngnathus scovelli (Gulf pipefish): 125993527
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Entry
125993527 CDS
T08785
Symbol
lrrc8ab
Name
(RefSeq) volume-regulated anion channel subunit LRRC8A
KO
K22038
volume-regulated anion channel
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125993527 (lrrc8ab)
Ion channels [BR:
sscv04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
125993527 (lrrc8ab)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_5
LRR_1
LRR_LRWD1
LRR_At5g56370
LRR_EndoS
Sp-CxC
Motif
Other DBs
NCBI-GeneID:
125993527
NCBI-ProteinID:
XP_049618069
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Position
3:complement(24583722..24589774)
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AA seq
795 aa
AA seq
DB search
MIPITELRYFVDTQPAYRILKPWWDVFTDYISIVMLMISVFGGTLQVTQDKMICLPCKWV
VDKTCKKNLNSSFIAPLSWEPKGIQYDLDRHQYNYVDAVCYETRLHWFAKYFPYLVLLHT
LIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVEESDPKPMKMNGSME
HKESVISEDVEASVPMLQRTKTRLEQGIVDRTDTGVLDKKEGEQAKALFEKVKKFRIHVE
EGDIVYRLYIRQTIIKVIKFILIICYTGYYVNDIKFSVDCNVDIQSLTGYNVYRCAHPLA
TLFKILACFYISLVVVYGFICMYTLCWMLRRSLKKYSFESIREESSYSDIPDVKNDFAFM
LHMIDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLDKLRQRITKNSQEKLELHLFML
SGIPDTVFDLMELEVLKLELIPDVTIPPIIAQLINLREMWLYHTPAKIEAPALAFLRENL
KSLHIKFTDIKEIPLWIYSLKNLSELHLTGNLSAENNRYIVIDGLRELKRLKVLRLKSNL
TKLPQVVTDVGMHLQKLSVNNEGTKLMVLNSLKKMVNLTELELIRCDLERIPHSIFSLHN
LQEIDLKDNNLKTIEEIISFQHLHRLVCLKLWYNQIAYIPIQIGTLINLEKLYLNRNKIE
KIPGQLFYCRKLRFLDLSHNNLTNIPADIGSLQNLQYLAVTANRIESLPNELFQCKKLRT
LNLGNNCLQSLPSRFGELTGLTQLELRGNRLECLPVELAECRQLKRTGLVVEEDLFNTLP
TEVKEQLWRTDKEQI
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatccccatcactgaactgcggtactttgtggacacacagccagcctaccgcatcctg
aaaccatggtgggacgtgttcacggactacatttccatcgttatgctcatgatctcggtg
ttcggtgggactcttcaggtcacccaggacaagatgatctgcttgccctgcaagtgggtg
gtggataagacgtgcaagaagaacttgaattcctcattcatcgcacctttgtcgtgggag
cccaaaggaatccaatacgatttggaccgccaccagtacaactatgtcgatgccgtgtgc
tacgagactagattacactggtttgccaaatatttcccctacctggtgttactccacacc
cttattttcttagcctgcagcaacttttggtttaagtttccccgcaccagctccaaacta
gaacactttgtgtccatcttactcaagtgcttcgactcgccgtggaccaccagagctctt
tcggagacggtggtggaagagagcgatccgaaaccaatgaaaatgaacggctccatggag
cacaaggagtcggtcatcagcgaagacgtggaggccagcgtccctatgctccagcgaacc
aagacgcgactcgagcagggcatcgtcgatcgaacggacacgggggtcctggataagaaa
gaaggcgaacaggccaaggctctctttgaaaaagtcaagaagttccgaatccacgtggaa
gaaggggacatcgtgtataggttgtacatccgtcagacgatcatcaaggtgatcaaattc
attttgatcatctgctacacagggtattatgtgaacgatatcaagttcagcgtggactgt
aacgtggatatacaaagtctgactgggtacaacgtatatcgttgcgctcatcccttggct
acgctctttaagatcttggcctgtttctacattagcttggtggtggtgtacggcttcatc
tgcatgtatactctgtgctggatgttgcggcgctccctcaagaagtattccttcgagtcc
attcgagaagagagcagctacagcgacatacccgacgtgaagaacgactttgccttcatg
ttgcacatgatcgatcagtacgacccgctctactccaagcgctttgccgtcttcctctcc
gaagtgagcgaaaacaaactgaggcagctcaacctcaacaacgagtggacgctcgacaag
ctcaggcagaggataaccaagaactctcaagagaagctggagctgcaccttttcatgctc
agcggcattccagacacggtctttgacctgatggagctggaggttctcaaactggagctc
ataccggacgtgaccatcccgccgataatcgctcagctcatcaacctgcgagagatgtgg
ctttaccacaccccggccaaaatcgaagctccggcgttggcttttttgcgggagaatttg
aagtccctgcacatcaaattcaccgatatcaaggagattcctctatggatttatagtttg
aagaatctcagtgagcttcacctcaccgggaatctcagcgctgagaacaaccgctacatc
gtcatcgatgggctgagggagctgaaaaggctcaaggttcttcgtttaaagagcaatctc
accaagctgcctcaggtggtgaccgacgtgggcatgcacctccagaagctgtccgtcaac
aacgaaggcaccaagctgatggtgctcaacagcctgaagaaaatggtcaacctgaccgaa
ctggagctgatccgctgcgatctggagcgcataccgcactccatcttcagcttgcacaat
ttgcaggagatcgatttgaaggacaacaacctgaagactatcgaggagatcatcagtttc
cagcacttgcacaggctggtctgccttaaactctggtataatcagattgcctacatcccc
atccagattggcacgctcatcaatttagagaaactctacctgaacagaaataagattgag
aagatccccggccagttgttttattgtcgcaagcttcgcttcctggacctgagccacaac
aacttaaccaatatcccggccgacatcggctccctgcagaaccttcagtaccttgccgtg
actgccaatcgaatcgagagcctgcccaatgagctgtttcagtgcaagaaactgcgcact
ttgaacctgggtaacaactgcctgcagtcgctgccgtcacgtttcggcgagctgacggga
ctgacgcaactggagctgagaggcaaccgtctggagtgtctgcccgttgagctggcggag
tgccggcaattaaagcgaactgggctggtcgtggaggaggacctcttcaacaccctgccc
acggaagtcaaagaacagttgtggcggacggacaaagagcagatatga
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