Syngnathus scovelli (Gulf pipefish): 125993540
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Entry
125993540 CDS
T08785
Symbol
ciao1
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein ciao1
KO
K24730
cytosolic iron-sulfur protein assembly protein CIAO1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125993540 (ciao1)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125993540 (ciao1)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125993540 (ciao1)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
125993540 (ciao1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Vps41
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_ELP1_1st
Beta-prop_TEP1_C
RMC1_N
Beta-prop_HPS5
B-prop_COPA_B_2nd
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
PROPPIN
Lactonase
Gmad1
Motif
Other DBs
NCBI-GeneID:
125993540
NCBI-ProteinID:
XP_049618092
LinkDB
All DBs
Position
3:complement(15164169..15166407)
Genome browser
AA seq
329 aa
AA seq
DB search
MKDNLILVQRLNAHPDSRCWFVCWSPNGTLLASCGGDKAIRIWGREGESWVCKGVLEDRH
ERTVRKVAWSPCGNYLASASFDATTSIWKKKNDEFENLVVLDGHENEVKCVAWSPSGNLL
ATCSRDKSVWVWEVDDDDEYECSTVLNSHTQDVKHVTWHPTQELLASASYDNNICIYKEV
DDDWECQATLQGHTSTVWSLSFSATGEMLASCSDDRTVKIWKEYPAESGQGNMSWKCVCT
LSGYHGRTVFDVDWCRLTGALATASGDDAVRVFKEEPSPDPDQPLFSLAAHMPKAHSQDV
NSVAWNPKEAGLLVSCSDSGDIAIWRFQD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaatttgattctggttcagagactgaacgcgcacccagactctcggtgctgg
ttcgtttgctggagtccaaacgggactctcttggcctcgtgtgggggcgacaaggccatc
cggatctggggacgagagggtgagtcgtgggtctgcaaaggtgtactggaggaccgccac
gagcgcactgtgaggaaggtggcgtggtctccctgtgggaattatctggcctctgctagc
tttgatgccaccacgtccatctggaagaagaaaaatgatgaatttgagaacttggtcgtg
ttggatgggcatgagaacgaggtgaaatgtgttgcttggtccccttcagggaacctgctg
gcaacatgcagccgggacaaaagtgtttgggtttgggaagtggatgacgatgacgaatac
gaatgtagtacagtactgaactctcatacacaagatgttaaacatgttacatggcacccg
acgcaggaacttctggcgtcagcgagctacgacaacaacatctgtatttacaaagaagtg
gacgacgactgggagtgtcaggccacgctgcagggccacacgtccaccgtatggagtcta
tcattcagcgccactggagagatgctggcgtcatgcagcgatgatcgtactgtcaagatt
tggaaagaatatcctgctgaaagtggtcaaggtaacatgtcctggaagtgtgtatgcacg
ctctccggctaccatggacgcacagtctttgacgttgactggtgtcgtctgacaggcgcc
ctagcaactgctagcggtgatgacgcggtgcgagtattcaaggaggagccgtcgcctgac
cctgaccagccgctattctcgctggccgcacacatgcccaaagctcacagccaggatgtc
aacagtgtggcatggaacccaaaagaagcaggactgctggtttcttgtagcgacagcggt
gacatcgccatctggaggttccaagattag
DBGET
integrated database retrieval system
