Syngnathus scovelli (Gulf pipefish): 125993549
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Entry
125993549 CDS
T08785
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125993549 (arhgef28a)
Membrane trafficking [BR:
sscv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125993549 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
Ank_2
Ank
PH_13
SOS1_NGEF_PH
Ank_4
DUF3079
Motif
Other DBs
NCBI-GeneID:
125993549
NCBI-ProteinID:
XP_049618114
LinkDB
All DBs
Position
3:complement(24971027..24994565)
Genome browser
AA seq
1787 aa
AA seq
DB search
MELSRRKVPLYGQAKVFALLDGLDSMPEDAEVFIVLEGSTLVHVTRAQSDVMLCFIVPGH
NLAEVVSVQAYLSSESTPLTWVGGAMLEYVQDDAQDLAEHLVTRGHSLNSLDHTELSSLF
NLGQQSSRWAMDRRVALAMANLDIPPNWNILGTPSRDDGSPKDSLLHLAVRWGLCRLAEL
LLCQPGGLMAVNVPNEDGVTPLQLAYSSGNGELLQLLLHPPNPLATPPAGLSQVWADRSR
LLRYCHDTGNLTLTVRQNLKWSSEESRHADIQLLRNRLGDEGFLREIKALRRERTESVFG
KEQLVDEPAENGPFADKSGDNSAADDNDYEEPLMFCLNQEDQEDERSDSEKSQSTGESQT
SSPTLAAAARLSAMIHGKDRVYANAVVADQADDVDVKYRSGLSPDVGSLCWDPFSTISPD
WRTCPRNDERAVRSQKSKESPLRVSPPPSFPSSPLASAFRLFEGGQRRRPRSSFPVSPTL
NGGRCNLPLAAAHGLSPSLECDSGEEDLLGRSYPCSAPTLQSGLPDLKPSQKLSKKPEEG
EVRLRSYSYSSAKARPSRPSLNRDATITDLAEDGAFSGSRRSLLQALWLSKSLSRLNQVK
QSVLNLSETSKEKRVLGFRKRAQSAEEESGASLQHLTLSEFLKEMEDEEWDKYIVPSKVE
SEKYKVSRTFSFLKSRMSSTRGKTKVKGKEVKDGKDKNRGVNGHQFAPASPSAPAVCVAC
DKSICGKDALQCSNCLVNVHKNCRDSVAQCGKKLQEKNVSLMKSKNLSLPQTSAKDLVST
SPVASSSVPSSLSLTPTTKEKSETLKPLSKSLSASLESRRPSDTAAMEVDSVPPSYGSQP
DEGAPLPASLPSVVSQDDVVAPLLSDLSADLLGLDVESWSLAVSPDFCRQHDRRAVKRQD
VIYELMQTELHHIQTLTVMSEVFRRGMLEELQLGWDCVARIFPCLDSLLLFHRNLFGSLQ
ERRQAASQADNPRNYLISQIGDVLLQQFSDGNAETMKRVYGDFCSHHLEAVSVFKELQQH
NKKLQIFVKQQSNNLLVRRREIPEFILLVTQRITKYPVLLERILHYTQEGSQEHTDLSSA
LAGIRDIIGAVDLTVSEYERSQELREVLARLENKSFAKLKSGKVIRKQDLHSKHRHLRHK
GLLYWKTATGRLKDTLALLLTDVVVILQEKDQRFVFAAVDQKPPVIPLQKLIVREVANEE
RGMFLISASSAGPEMYEVHTSTREERNAWMRHIRQAVESCPEEEEEEEEEEQQQQQQQQR
STETEEAKRAAEVKVQKISKFQETLFIQDQRICTSLEEKLQLYAELTELTLRSPEAIPHR
HLLVQAELDSESPRPASTLLAAALREAENLIRILQVHDGERDNSPVRGCECPNYNSHGSS
IQESPSEPDYLSTLSMSSTSLGSDSEGTDGISWSEEPKQSHTEETLFKVAESVQSLTQLL
YSLQAAVTLQDSCLEIQKILLQEGDQSQLKSLASLQNTLETAVEKRKEDVEKKATERKKE
EVDEVHKLHVKLKLEQQRWDKKCVARDKRQTEQEGALEQRERHCILEAQRLRCERQELET
QLMEYRHSLDRLRDGQESVDREKEKLRAQQCLLQSWRHNRQSSLPVTIPLDEYEVPIHSR
SGSLDGSCWTYEKDAALLASLQKKQQQQHLLSGPRQSSTFGGADLSLSASLYNSLNTLLS
QTHRKHSQDALTLGEKNHGRDQPLDTSANPFADRGTAQPQSVGKYLSPQSEGRSPRAWRP
EMPGQELSQDAYSSSSPSLTPLLPQQSYLSLEGHLREDASEENIVYL
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atggagttgagcagaaggaaagtgcccctatatggccaggccaaggtgtttgcattactg
gacgggctggattccatgccggaagatgccgaagtcttcattgttctggaaggatccacg
ctggtccatgtcaccagggctcagagtgacgtcatgctctgcttcatcgtgcccggccat
aacctcgccgaggtggtctctgtgcaggcctacttgagctccgaaagcacacctctcaca
tgggtgggcggcgcaatgctggaatacgtccaagacgacgcacaggacctggcggagcac
ctggtcacccgcggacatagtctgaactctctggatcacacagagctgagcagcctcttc
aacctgggccagcagagctcccgctgggctatggatcgacgcgtcgctctcgccatggct
aacctggatattcctccaaactggaacattctggggactcccagcagagatgatggcagc
cccaaagactctctgctccacctggccgtgcgatggggtctgtgtcgactggccgagctg
ctgctttgtcagcccggaggtctgatggccgtcaacgttccaaacgaggacggcgtcaca
ccgctgcagctggcctactcatcgggcaacggagaactcctccagctcctcctgcaccca
cccaaccctctagccacacctcccgcaggactgtctcaggtatgggcagaccgctcccgc
ttgctgagatactgtcacgacacggggaatttgacactgaccgtccgacaaaatctcaag
tggagctcagaggagagccggcatgctgatattcagctgctcagaaacagacttggagat
gagggcttcctcagagagatcaaagcgttaagaagagaacgaacagagagcgttttcggc
aaagaacaattggtggatgagccagcagaaaacggaccttttgctgataagagcggagat
aattcagctgcagacgataatgactacgaggagccgctcatgttttgcctcaatcaagag
gaccaagaggacgagcgatctgactctgaaaaaagccagtccacgggcgagagccagacc
tcatcgccgactctggctgccgctgccaggctgtcggcgatgatccacgggaaagaccga
gtctatgccaacgccgtggtggcggaccaagcggatgatgttgatgtgaagtaccgctct
ggcctgtcacctgatgttggcagcctttgctgggatcctttctccacgatatcccctgac
tggaggacgtgtccacgcaatgacgagagagctgtccgaagccagaaatccaaggagtcg
cctctccgcgtctccccccctccgtctttcccgtcctcccccctggcttccgccttccgt
ttgtttgaaggaggtcagaggcgacggccgcgaagcagctttccagtttctcccactttg
aacggcggacgatgcaacttgccgctggcggcagcccacggactgagtcccagtcttgag
tgtgacagcggagaagaggacctactgggacgctcgtacccctgctcagccccaacgctg
cagtccggcttgccagacttgaagccatcgcaaaagctctccaagaagccggaggaaggc
gaggttcgactgcgctcgtactcctactcctctgccaaggcgaggccctcgcgcccctcg
ctaaacagagacgccaccattactgacctggcagaagacggtgcattcagcggcagccgt
cgctcgctccttcaggctttatggctgtccaaatcgctttctcgactcaaccaagttaag
cagagtgtgctgaacctgagcgagacttccaaggaaaagagggttttgggtttccgtaag
cgggcccagtcagcagaggaggagagcggcgcatcactccaacacctcaccctctccgag
tttcttaaagagatggaggacgaggagtgggacaagtacatcgttccgtccaaggtggag
tcagagaaatacaaagtgagccggaccttcagtttcctcaagagcaggatgtccagcact
cgtggcaaaaccaaggtgaaagggaaagaggtgaaggatggcaaggacaagaacagaggc
gtcaacggacatcagtttgcgcccgcgtctccatctgctcctgctgtctgtgtggcctgc
gataagtccatttgtgggaaggacgcgctgcagtgctccaactgtttagtgaacgtccac
aagaactgccgagactctgttgcacaatgcggaaagaagctgcaggagaagaatgtatcg
ttgatgaaaagcaagaacttgtctctcccacagacttctgccaaagacttggtttccacc
tctccagtggcctcctcatcagtgccctcatccctctcacttacaccaacgaccaaagaa
aagtcagaaacgctcaagcctctttccaaaagcctctccgcctccttggagagcaggcgg
ccgagtgatacggcagcaatggaggtggattccgttcctccgtcgtatggctcacagccg
gacgagggcgctccacttccggccagtcttccttcggtcgtctcgcaggatgatgtcgtt
gccccgctactaagcgatctgtcggccgacctgctggggctcgacgtcgagtcgtggagt
ctcgcggtcagtccggatttctgcaggcaacacgacagacgtgccgtcaaacggcaggat
gtcatttacgaactgatgcagacggagctgcaccacatccagactctgacggtcatgtcc
gaagtgttcagacgaggcatgctggaggagctgcagctaggctgggattgcgtggcccgc
attttcccctgcttggattccttgctgctcttccacaggaacctttttggatccctgcag
gagcgcagacaagcggcaagccaagccgacaacccgagaaattacctcatcagccagatt
ggagacgtccttcttcaacagttctccgatggaaacgctgagaccatgaagcgggtgtac
ggagatttctgcagtcaccacttggaagctgtcagtgtcttcaaggagcttcagcagcat
aacaaaaaactccagatctttgtcaaacaacagagcaataacttgctggtcaggagaaga
gagattccagagttcatccttttagtcacccagcgcatcaccaagtacccggttttgttg
gagaggattttacattacactcaagaaggcagtcaagaacacacagacctatcgagcgct
ctggctggcattcgtgacatcatcggcgccgtggacctgaccgtgagtgagtacgagcga
tctcaggagctgcgggaagtgctcgcccgtctggagaacaagagctttgccaaactgaag
agcggcaaggtgattcgcaagcaggacctgcacagcaaacaccgacatctacgacacaag
ggattgctttactggaagactgccacgggccgcctaaaagataccttggcactcctgctt
acagatgtggtggtgatcctgcaagagaaagatcaacgctttgtatttgcggccgtggac
cagaagcctcccgtgatcccgctgcaaaagctcatcgtgagagaagtagccaatgaggag
cgcgggatgtttctcatctctgcttcctcagccggtccggagatgtatgaagttcacacc
agcaccagagaggagagaaatgcttggatgagacacatcagacaagctgtagagagctgt
ccagaggaagaggaggaggaggaggaggaggagcagcagcagcagcagcagcagcagcgt
agcaccgaaacagaagaggccaagcgagcggccgaagttaaagttcagaaaatctcaaag
ttccaagagacattgttcattcaggaccagcgtatctgcaccagcttggaggagaagtta
cagttatatgctgagctcacagagttaacgctgcgctctccagaagccattccacatcgc
cacctgctggtacaagcagaacttgacagcgagtccccaagaccggcctccacactgctc
gcagccgcactcagagaagcggaaaacctgatccgcattcttcaggttcacgacggagaa
cgtgacaattctcccgtccgtggctgcgagtgccccaactacaacagccacggcagcagc
atccaagagtcgccctcagaacccgattacctgagcacgcttagtatgagctccacttct
ctcgggtcggacagcgaagggacggatggaatctcgtggagcgaggagccaaagcagagt
cacaccgaagaaacactcttcaaggtggctgagagtgtgcagagtctgactcagcttctt
tatagtctgcaggctgcggtgactctccaggacagctgcctggagatccaaaaaattctc
cttcaggaaggagaccaatctcagctcaagagccttgcctcgctccaaaacaccttggag
acggccgttgagaagaggaaagaggatgtcgagaagaaggcgacagagaggaagaaggaa
gaagtggacgaggtgcacaaacttcatgtgaaattgaaactagagcagcagcgctgggac
aagaagtgtgtggctagagacaaacgacagactgagcaggaaggcgcactggagcagcgt
gagcgccattgcatcctggaggcccaacggctgcgatgtgagcgccaggagctggaaact
cagctgatggaatatcgacacagtctggacagactgcgggacggccaggagagtgttgac
agggaaaaggagaagctccgagcccagcagtgtctcctccagagttggagacacaaccgg
cagagcagtctgcccgtgaccatacctctcgatgaatacgaggtgccaattcacagtcgc
tcaggcagccttgacggcagctgctggacgtacgagaaggacgcagctctgctcgcctct
cttcagaagaagcagcagcagcagcatctgctctccggcccccggcaaagctccaccttt
ggcggtgctgacctcagccttagcgccagcctctacaacagcctcaacaccctgctgagc
caaacgcacagaaaacactctcaggatgctctcaccttgggcgagaagaatcacgggcgc
gaccagcctctcgacacctcggccaatcccttcgccgacagaggcacagcgcagccgcag
agcgtcggcaaatacttgagtccgcagtcggagggccgttccccgagggcctggaggcca
gagatgcccggccaagaactttcccaagacgcttactcctcctcttctccttccctcacg
ccgctcctcccccagcagtcctacctctctctggaaggacatcttagggaggacgcaagc
gaggagaacattgtttacctttga
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integrated database retrieval system
