Syngnathus scovelli (Gulf pipefish): 125993559
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Entry
125993559 CDS
T08785
Symbol
fbxw11a
Name
(RefSeq) F-box and WD repeat domain-containing 11-A isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04114
Oocyte meiosis
sscv04120
Ubiquitin mediated proteolysis
sscv04218
Cellular senescence
sscv04310
Wnt signaling pathway
sscv04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125993559 (fbxw11a)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125993559 (fbxw11a)
04340 Hedgehog signaling pathway
125993559 (fbxw11a)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
125993559 (fbxw11a)
04218 Cellular senescence
125993559 (fbxw11a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125993559 (fbxw11a)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125993559 (fbxw11a)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125993559 (fbxw11a)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
125993559 (fbxw11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box-like
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_DCAF4
WD40_like
Beta-prop_HPS5
Beta-prop_IFT140_1st
F-box
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_VPS8
WD40_2
DUF6188
Motif
Other DBs
NCBI-GeneID:
125993559
NCBI-ProteinID:
XP_049618157
LinkDB
All DBs
Position
1:12000262..12022017
Genome browser
AA seq
555 aa
AA seq
DB search
MDPEMEDKTLDLMQEQDRCPAEIDRWMVALTKQQQCLKPIENTSGMESQNLVDDLSPKKN
TVLKLSNGPVVGSRKRPSEGNYEKEKEHCIALFDQWSEADQVEFVERLISRMCHYQHGHI
NSYLKPMLQRDFITALPAQGLDHIAENILSFLDARSLCAAELVCKEWQRVISEGMLWKKL
IERMVRTDPLWKGLSERHQWEKYLFKNRTSEVPPNSYYHSLYPKIIQDIETIEANWRCGR
HNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKQSLECLKILTGHTGSVLCLQ
YDERVIVTGSSDSTVRVWEVTTGEVLNTLIHHNEAVLHLRFANGLMVTCSKDRSIAVWDM
ASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA
CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKV
WDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVSTNGQ
SEGRSPSRTYTYISR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggatccggagatggaggacaaaacgttggatctgatgcaggaacaagacagatgccct
gctgaaattgacaggtggatggtcgccctgacaaagcagcagcagtgcctcaagcctatt
gagaatacgtcggggatggagtcacagaatctagtggatgacctgtcgccaaagaagaac
actgttctcaagcttagtaatggtcctgttgtggggtcccgcaagcgcccgtcagagggg
aactacgagaaagaaaaggaacactgcatcgccctgtttgaccagtggtcagaggctgac
caggtggagtttgttgagcgtctcatctcccgaatgtgccactaccaacatggccacatt
aactcctacctcaaacccatgctacagagagactttatcacagcactaccagcccaaggc
ttagatcacatagcagaaaacatcctgtctttcctggatgcacgttcactttgtgcagca
gagctggtgtgtaaagaatggcagagggtcatttctgaggggatgctgtggaagaagctc
atagaacgtatggtccgcactgatccactatggaaaggactgtccgaaagacatcagtgg
gagaaatatctgttcaaaaatcgcacgtctgaagtcccgcccaactcttattatcactcc
ctttatcccaaaatcatccaagacatagagacaattgaggctaactggcggtgtggaaga
cacaatttgcaaaggattcaatgccgctcagaaaatagtaaaggggtttattgtctccag
tatgatgacgacaagatcatcagtggccttagggacaattccatcaagatatgggataaa
cagtcgctggagtgtctgaagattctgactggtcacacaggttcagtgttatgcctccag
tatgacgagagggtcatcgtcactgggtcatcggactcaactgttagggtgtgggaggtg
acgacgggcgaggtactcaacacgctgatccaccacaacgaggccgtgcttcatttacgc
ttcgccaacggccttatggtcacttgttccaaagaccgctcaatcgctgtgtgggacatg
gcctcgccaaccgacattagcttacggcgcgtcctcgttggacatcgggcggccgtcaac
gtggtcgactttgacgacaaatatattgtatcagcctcaggggaccgcaccatcaaggta
tggagcaccagcacctgtgaatttgttcgcacgcttaacggccacaagcggggcattgcc
tgtctacagtaccgggatcgactggttgtcagcggctcatcggataacacaattaggtta
tgggacattgaatgtggggcatgtttgcgagtgctggaaggtcatgaagaactggttcgt
tgcatacgctttgataacaagaggattgtcagtggcgcctatgatggtaaaatcaaagta
tgggacttgcaagcagccttggacccacgagcccctgcaagcacactatgcctgcgtact
ctagtggagcattctggccgcgtgttccgtctgcagtttgatgagttccagattatcagc
agctcacacgacgacaccattctgatctgggactttttgaacgtctcgaccaatggccag
tcagagggacgatctccttcccgcacctacacttacatttctagatag
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