Syngnathus scovelli (Gulf pipefish): 125993568
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Entry
125993568 CDS
T08785
Symbol
bmp1a
Name
(RefSeq) bone morphogenetic protein 1a isoform X1
KO
K05502
bone morphogenetic protein 1 [EC:
3.4.24.19
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125993568 (bmp1a)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sscv04052
]
125993568 (bmp1a)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.19 procollagen C-endopeptidase
125993568 (bmp1a)
Peptidases and inhibitors [BR:
sscv01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
125993568 (bmp1a)
Cytokines and neuropeptides [BR:
sscv04052
]
Cytokines
Transforming growth factors (RSTK binding)
125993568 (bmp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
Astacin
CUB_M02D8_5_3rd
FXa_inhibition
EGF_CA
CDCP1_CUB_6
cEGF
EGF
hEGF
EGF_3
CUB_2
Peptidase_M10
GPR158_179_EC
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
125993568
NCBI-ProteinID:
XP_049618173
LinkDB
All DBs
Position
3:complement(24437536..24462699)
Genome browser
AA seq
1137 aa
AA seq
DB search
MMMMDGYPLLSCWEELLSFLPSFLPSFLPSFLPSFLPSFLPSFLPSFHTVPVFVPTSLFF
FLSFLCNAPNSSAEDVFRRQVAVKTRPFNLVCCLLSCAYTCTPTSRFCRARVIKMPSEGV
LFTAPEDLQPYHQSFSSSSRQSPGAPAGGQQLLESLPPQSQIDTGESTIMDLAARCLLLL
PCLGVIVALDLETIDPSYFVEPAATSEVIDYKDPCKAAAFLGDIALDEEDLKSFKVDRII
DLASRTVQIVNRTNTGSPNSQNRQSSHRRKRAATSRPERVWPEGVIPYVISGNFSGSQRA
IFRQAMRHWEKHTCVTFNERTLEESYIVFTYRPCGCCSYVGRRGGGPQAISIGKNCDKFG
IVVHELGHVIGFWHEHTRPDRDEHVSIIRDNIQPGQEYNFLKMEPGEVDSLGEVYDFDSI
MHYARNTFSRGIFLDTILPRYDVNGVRPPIGQRTRLSKGDIAQARKLYKCSKCGDSLQDS
NGNFSSPGFPNGYSAYMHCIWRISVTPGEKIILNFTSMDLYRSHLCWYDHVEIRDGYWRK
APLKGRFCGDKLPESIISTDSRLWIEFRSSSNWVGKGFSAVYEAVCGGEVKKDSGQIQSP
NYPDDYRPNKACVWKVTVAQGYHVGLTFQSFEIERHDSCAYDYLEVRDGNSENSPLLGRF
CGYDKPDDIKTSSNQLWMKFVSDGSVNKAGFAANFFKEMDECSKPDNGRCEQRCVNTLGS
YKCACDPGYELAADKRSCEAACGGFITKLNGSITSPGWPREYPPNKNCIWQLVAPTQYRI
TLLFDVFETEGSDVCKYDYVEVRSGLSADSRLHGKFCGAEKPEAITSQYNNMRIEFKSDN
TVSKKGFKAQFFSDKDECSKENGGCQHECVNTFGSYSCQCRSGFVLHDNKHDCKEAGCDH
TVTSVSGTITSPNWPDKYPSKKACTWSLTTTPGHRIKIAFNEIDMEAHLECAYDHIEIYD
GKDGKAQSIGRYCGTKKPQPVTSTGNKLFIRFYSDNSVQKKGFEASHSAECGGRLKAEVK
TKDLFSHAQFGDNNYPGASDCQWVISAEKGYGVELIFQTFEIEEEADCGYDYMELFDGAD
TKSPRLGRYCGSGPPEEIYSAGDSIVIKFRSDDTINKKGFHVRYTSTKFQDTLHSRK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggatggataccctctactttcttgttgggaagaattgctttccttcctt
ccttccttccttccttccttccttccttccttccttccttccttccttccttccttcctt
ccttccttccttccttccttccataccgtcccagttttcgttcccacaagccttttcttc
ttcttgagttttctgtgtaatgcacctaattcgtctgccgaggatgtatttcgccgacag
gtggcagtaaagacgcgccccttcaaccttgtttgttgtttgctttcgtgtgcgtacacg
tgcacaccaacgtcccgtttttgtcgtgcacgcgttataaaaatgcccagcgaaggggtg
cttttcaccgcccccgaggatctgcagccatatcatcaaagtttctcaagcagttctcga
cagtcgcctggagctccagctggaggacagcaattacttgaatcacttcccccccagagc
caaatagacaccggagagagcacaatcatggatctcgcggcgagatgtttgcttctcctt
ccctgcctcggtgtgattgtggcactcgatttggagacgatcgaccccagctacttcgtg
gagcccgctgccacatcggaggtgatcgactacaaggatccctgcaaagctgctgccttt
ctgggagacatcgctctggatgaggaagacctgaagtcatttaaagtggatcgaattata
gatttggcctccagaactgtccagattgttaatcgcacaaacacagggtctccgaatagc
caaaacagacaaagctctcaccgtaggaaacgggccgccacgtccagaccggagcgtgtt
tggcctgaaggtgtcattccatatgtcatcagtggtaatttcagcggcagccaacgagcg
atattccgccaagccatgcgccactgggagaagcacacctgtgtgaccttcaatgagagg
acgctggaggagagctacattgtcttcacctaccgaccgtgcgggtgctgctcctacgtg
ggccggcgcggaggaggcccccaggctatatccattggaaagaactgcgacaagtttggt
atcgtggtgcacgagctgggccacgtgatcggcttttggcacgaacacacgcggcccgat
cgagacgaacacgtcagcattatcagagacaatattcagccaggtcaggagtacaacttt
ttgaaaatggagcccggggaggtggattccttaggagaggtctacgatttcgacagtatc
atgcactatgcccggaatacattctccaggggcatcttcctggacaccatcctgccgcgc
tacgatgtgaatggtgtgcgaccacccattggccagagaaccagacttagcaaaggggat
atcgcacaggcacgcaaactctacaaatgctccaaatgcggggacagtctgcaggacagc
aacggcaatttttcctctccgggtttccccaacggatactcggcttacatgcactgcatc
tggagaatatccgtcacgccgggagaaaagatcattctgaacttcacttccatggatcta
tacagaagtcacctgtgctggtatgaccatgtggaaatccgggacggatattggaggaag
gcgcctctcaaaggtcgattctgcggcgacaagctacccgagtcaatcatctccaccgac
agccggttgtggatcgaattccgcagcagcagcaactgggtgggcaaaggtttctctgcc
gtttatgaggccgtgtgtggtggggaggtgaagaaggacagcgggcagatccagtccccc
aactaccccgatgactacagacccaacaaagcatgcgtatggaaggttaccgtggctcag
ggctaccacgtaggcctcaccttccagtcctttgaaattgagagacatgacagttgcgcg
tacgactacctggaggtgcgtgacggcaactcggagaacagccccctgctgggccgcttc
tgcggctatgacaaaccagatgacatcaaaaccagctccaaccagctgtggatgaaattt
gtttcagatggctctgtcaacaaggccggctttgcagccaacttcttcaaagagatggat
gagtgctccaagccagacaacggtcgctgcgagcaacgctgtgtcaacacgctgggcagc
tacaagtgcgcctgcgacccgggctacgagctggctgccgacaagcgcagctgtgaggct
gcctgcggaggcttcatcaccaagctgaatggttccatcaccagccccggttggcccaga
gaataccctcccaacaagaactgcatctggcagctggtggcccccacgcagtaccgcatc
actctgctctttgacgtcttcgagaccgagggcagtgacgtttgcaagtacgactacgta
gaggtgcgcagcggactgtcggcagattccaggctgcacgggaagttctgcggcgccgag
aaacccgaagccatcacctctcagtacaacaacatgcgcatcgagttcaagtccgacaac
accgtgtccaaaaagggctttaaagcacagtttttctcagacaaagacgagtgctccaag
gagaacggcggctgtcagcacgaatgcgtcaacaccttcggaagctacagctgccagtgc
aggagcggctttgtgctgcacgacaacaagcacgactgcaaagaggccggctgcgatcac
acagtgaccagtgtgagcggtaccatcaccagtcccaactggcccgataaatatccaagc
aagaaggcgtgcacttggtcgctcaccaccacgcccggccaccgcatcaaaatagctttc
aatgagatcgacatggaggctcacctggagtgcgcttacgaccacatcgaaatctacgac
gggaaagacggcaaagctcaaagcatcggtcgctattgcggcacaaagaagccgcagccc
gtcacgtccaccggcaataaactcttcatccgcttttactctgacaactccgtgcagaag
aaaggctttgaggcatcccactctgcagaatgcggcggtcgcctgaaggccgaggtgaag
accaaggacctgttctcgcacgcccagttcggggacaacaactaccccggggcttccgac
tgccagtgggtgatctcggccgagaaaggctacggcgtggagctcatcttccagaccttt
gagatcgaggaggaggcggactgcggctacgactacatggagctctttgacggggctgac
accaagtctccgcggttgggacgttactgcggctcaggaccacccgaggagatctactcg
gccggcgactccatcgtgatcaagttccgttctgacgacaccatcaacaagaaaggattc
cacgtgcgctacaccagcaccaagttccaggatacgctgcattcgcgcaagtga
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