Syngnathus scovelli (Gulf pipefish): 125993594
Help
Entry
125993594 CDS
T08785
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125993594 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sscv01007
]
125993594 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125993594 (tars1)
Enzymes [BR:
sscv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
125993594 (tars1)
Amino acid related enzymes [BR:
sscv01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
125993594 (tars1)
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125993594 (tars1)
Prokaryotic type
125993594 (tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
125993594
NCBI-ProteinID:
XP_049618226
LinkDB
All DBs
Position
3:complement(24868259..24875142)
Genome browser
AA seq
724 aa
AA seq
DB search
MAEQTVVDKMSQLNVAEGQKGGAPNGKDGGKKKVKNIAGDAGGRAELSPAPEYIDERLTL
YAKLKAEHDALMAERAAKESHPIKVTLPDGKVVDAESWKTTPYQVACGISQGLADNTVIA
KVNKGVWDLDRPLEDHCSLELLKFDDDEAQAVYWHSSAHILGEAMERVYGGCLCYGPPIE
NGFYYDMFLDGNEGVSSNDFPCLEGLCKKIIKEKQPFERLEIKKETLLEMFKYNKFKCRI
LNEKVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMESLQRIYG
ISFPDPKMLKEWEKFQEEAKNRDHRKLGREQDLFFFHDLSPGSCFFLPKGAFIYNTLIEF
IRSEYRKRGFQEVVTPNIYNSKLWQTSGHWQHYSENMFSFEVEKETFALKPMNCPGHCLM
FDHRPRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCSMDQIEDEIKGC
LDFLRTVYDVFGFTFKLNLSTRPEKFLGEPAVWEQAEKQLENSLNDFGEKWVLNPGDGAF
YGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLSFVSHDGDDKKRPVIIHRAILGSVER
MIAILTENYGGKWPLWLSPRQVMVVPVGPTCEDYAQKVQQDFHNAGFMSDVDLDPGCTLN
KKIRNAQLSQYNFILVVGEKEKTSNTVNVRTRDNKVHGERGVDDCIRRLKELKLSKSRNA
EEDF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacagactgtcgtggacaaaatgagtcaactcaacgttgccgaaggtcaaaag
ggaggagcaccgaatggtaaagatggaggaaagaagaaggtgaaaaatattgcaggagat
gctggtggcagagctgagctttcaccagcaccggagtacattgatgagcgcctgacgtta
tacgccaagctcaaagctgagcacgatgccctcatggcagagagagcggccaaagagtct
caccccattaaagtcactttacccgacgggaaagtggtggacgcagagtcttggaagacc
accccttaccaagtggcttgtggaatcagtcaaggtctggccgacaacacggtgattgcc
aaggtgaacaaaggcgtgtgggatctggaccggcctctggaggaccactgcagtctggag
ttgctcaagtttgacgatgacgaggctcaagctgtttactggcattccagcgctcacatc
ctgggtgaagccatggagcgagtctacgggggctgcctgtgctacggtccgcccatcgag
aacggcttctactacgacatgttcctggacggcaacgagggggtgtcgagcaatgacttc
ccctgtctggagggtctgtgcaagaaaatcatcaaggagaagcagccatttgagaggctg
gagatcaaaaaggaaactctgctggagatgttcaagtacaacaagttcaagtgccgcata
ttgaacgagaaggtcaccactcccaccacaacagtttacaggtgcggccctttaatcgat
ttgtgtcggggtccgcacgtgaggcacacaggaaaaatcaaggcacttaagatccacaag
aactcctccacatactgggagggaaaagcggacatggagagcctccagcggatatatgga
atctctttccccgaccccaaaatgctgaaagagtgggagaagtttcaggaagaggccaag
aacagagatcatcgcaaactgggccgggagcaggatctgttcttctttcacgacctgagt
ccagggagctgcttctttctgcccaaaggcgccttcatctacaacacgctgattgagttc
atcagaagcgagtacaggaaaaggggcttccaggaggtggtgacgcccaacatctacaac
agcaaactgtggcagacctccggccactggcagcattacagcgaaaatatgttctccttc
gaggtggagaaggaaacatttgccctcaaacctatgaactgcccgggccattgtctgatg
tttgaccaccggccacgctcgtggagagagctgccgctgcgcatggctgactttggcgtc
ctgcaccgcaacgagctatcgggggccctcaccggcctcacccgcgtccgccgcttccag
caggatgacgctcacatcttctgctccatggatcagatcgaggacgagatcaagggctgc
ctggacttcctgcgcaccgtctacgacgtgttcggcttcacgttcaagctaaacctctcc
acgagacctgagaaattcctgggagagcccgccgtttgggagcaagcagagaagcaactg
gagaacagcttgaatgactttggggagaaatgggttctcaacccgggtgacggagctttc
tacgggccaaagatcgacatccagatcaaggacgccatcggccgataccatcagtgcgcc
accatccagctggacttccagctacccatccgcttcaatctctcttttgttagccatgat
ggagatgacaagaagagaccagtgatcatccacagagccatcctgggatcggtggagcgg
atgatcgccatcctgacggaaaactacggaggcaaatggccgctgtggttatcacctcgc
caagttatggtcgtccccgtgggaccaacctgtgaggactatgcgcaaaaggttcaacaa
gactttcacaacgccggcttcatgagcgacgtggatctagatcccggatgcactctaaac
aagaagattcgaaacgcccaactgtcacagtacaactttatcctggtggtgggggaaaaa
gagaagacgagtaacacagtgaacgtgcgcactcgggacaacaaagttcacggcgagcgc
ggtgtggacgactgcatccgacgtctcaaagagctcaaattgtctaagagccggaacgca
gaagaggatttctga
DBGET
integrated database retrieval system
