Syngnathus scovelli (Gulf pipefish): 125993623
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Entry
125993623 CDS
T08785
Symbol
ccdc117
Name
(RefSeq) coiled-coil domain-containing protein 117 isoform X1
KO
K27967
coiled-coil domain-containing protein 117
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125993623 (ccdc117)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125993623 (ccdc117)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125993623 (ccdc117)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
125993623 (ccdc117)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC117
Motif
Other DBs
NCBI-GeneID:
125993623
NCBI-ProteinID:
XP_049618279
LinkDB
All DBs
Position
3:16210700..16213294
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AA seq
274 aa
AA seq
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MHHLAPTSSQLGFLPSMCTFSGPTNLPEFDLGSTCTSGQLQSGTLSNSSWEMRCLRKHRR
RVDDEGCLAKRRRISAETELDMSHVTGSPDWPSPNNCSTLSTQQASHAPPQPCPTPRNLT
PLLASSSPSRPETASSRMEIEAAQRRLREIENRITLEDDDEDLDVEPAQRRPVLVISDSL
KEGLQRGISDILPHTVAQSVSHSCMELVLWRPPENPFCRRLKGSLQKQRKPQTVLRQPPT
PCPSPTPHSTPVDTHSPLLNFPVAESCGEEDMEM
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacttggcgcccaccagcagccagctgggttttctaccaagcatgtgcacgttt
tcggggcccacaaaccttcctgaattcgatcttggatctacatgtacatctggccaactt
cagagtggaaccctgtccaacagcagttgggagatgaggtgcctcaggaagcacaggagg
agagttgatgatgaaggatgtcttgccaaaaggagaagaatatcagcggaaaccgaattg
gacatgtcacacgtcactgggagtcctgactggccttctccaaacaattgttctactttg
agtacccaacaagccagccatgctccaccacagccttgcccaacccctcgcaacctgaca
ccattgctggcctcttcttccccatcccgacctgagacggcgagctcccgcatggagatc
gaggcagctcagaggagacttcgggaaattgaaaatagaataacgctggaggacgatgac
gaggatctcgatgtggaaccagcccaacgaaggccggtgttggtcatctcagacagtttg
aaggaaggcctgcagcgaggcatcagtgacattctcccacacacagtagcccaatctgtg
agccattcctgcatggagctggtgttgtggcggccaccagagaaccccttctgtcgcaga
ctgaaaggctccttgcagaaacagaggaaaccacagactgttttgcgacagccccccact
ccatgtccttcgcccaccccgcacagcactcctgtcgacacgcacagccctctccttaac
tttccagtcgctgaaagctgtggagaggaggacatggaaatgtaa
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