Syngnathus scovelli (Gulf pipefish): 125993646
Help
Entry
125993646 CDS
T08785
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03022
Basal transcription factors
sscv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125993646 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
125993646 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125993646 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125993646 (gtf2h2)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125993646 (gtf2h2)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125993646 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
Motif
Other DBs
NCBI-GeneID:
125993646
NCBI-ProteinID:
XP_049618352
LinkDB
All DBs
Position
3:complement(4679594..4782788)
Genome browser
AA seq
398 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATVEEILFQSKRDRIIKSCGQIRLGMMRH
LFLVIDCSRSMEDQDLKPNRLTATLKLMEAFIEEYFDQNPISQVGIIFTKNKRAEKLTDL
SGNPKKHIAVLKKEVDTVCVGEPSLYNSLNLALQTLKHMPGHTSREILIILSSLTTCDPA
NIYEMIQTMKSLKVRVSVIGLSAEVRVCTILTRETGGSYHVILDESHFKELLLTLHVKPP
PASSSSECSLIRMGFPQHTFSSSTDQNAKPSFSMACLSYSLLDGTNDPGLSLGGYLCPQC
HAKYLELPVECKVCGLTLVSAPHLARSFHHLFPLHVFIETPVENTPEKRFCESCQGELKD
KRMFTCPSCRRAFCVDCDHFIHDTLHCCPGCVHCQRTP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagaactaaacgctgggaaggtggctatgaaaggacatgggaa
attttgaaggaggatgaatcaggatcactcaaggccacagttgaggagatcctttttcag
tccaaaagggacaggataataaaaagctgtggccaaataagactcggaatgatgcgacat
ctttttttagtaattgactgctctagaagtatggaggatcaagacttaaaaccaaaccgc
ctcactgcaactctaaagctgatggaagcttttattgaagaatattttgaccagaatccc
ataagccaggtgggaattatatttacaaagaataagagagccgaaaagctcactgaccta
tcagggaacccaaagaaacatattgctgttttgaagaaagaagtggacactgtgtgtgta
ggagaaccgtccttgtacaattccctgaacttggccttacaaaccctgaaacacatgcct
ggacacacaagtcgagagattttgatcatcctcagcagcctcaccacatgtgacccagcc
aacatctatgagatgattcagaccatgaaatcactgaaggttcgagtgtctgtaatcggc
ctgtctgcggaagttcgggtgtgtactatattgacgagggaaactggtgggtcataccat
gtcatcctggatgagagccatttcaaagagctgctactgaccctgcatgtgaagcctccc
cctgccagctcctcatctgaatgctcattaatacgtatggggttcccccagcataccttt
agctcttcgactgatcagaacgccaaaccctctttcagcatggcttgtttgtcttacagt
ctgttggatggtaccaatgatccaggtctctctttgggagggtatttgtgtccgcagtgc
catgcaaagtacttggaacttccagtggaatgtaaagtctgtggtttgactctcgtgtca
gccccgcacctcgccagatcgtttcaccacctctttcctctacatgtcttcattgaaaca
ccagtcgaaaacaccccagaaaaaaggttctgtgagtcttgtcaaggagaattaaaagat
aaaaggatgttcacctgcccatcctgtcgcagagcattttgtgtagactgcgatcacttc
attcatgatacactacactgctgccctggttgtgttcactgtcagcgcaccccttaa
DBGET
integrated database retrieval system
