Syngnathus scovelli (Gulf pipefish): 125993692
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Entry
125993692 CDS
T08785
Symbol
nipbla
Name
(RefSeq) nipped-B-like protein A isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125993692 (nipbla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125993692 (nipbla)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
125993692 (nipbla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
HEAT_GCN1_C
DUF8035
Cnd3
TPR_DNAAF5
Motif
Other DBs
NCBI-GeneID:
125993692
NCBI-ProteinID:
XP_049618458
LinkDB
All DBs
Position
3:complement(17661223..17684135)
Genome browser
AA seq
2532 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVTCLLGCRDEN
LATQLAHGLNQVSTEHIELKDNLGSDEPEGDAPLLLQTMLARNPGIFREKNVMQQPMVQQ
YKITQNSMHSPAQSANFQPAAISPNPSSRFVPPQTGSSSRYLGQQNSPVPSPYTPQSPAP
GYIQQYPHQQPPSYNQHQQIQQVSVASPMVPGSIRNIHEGKVSGINAANHHPDRHGTDDY
LNIVHRLGSEEGDSALRNPSFPLRSPQSGCSPAAGEGTPKPGSRPPLILQSPPPYAPSPR
EGGLDQKQHLQQRRKIPAVKEEKDMYDIVSSPNKDSTKLTLKLSRVKSNESDPSGDTVPG
MDHNSDNMEAELGFQQVPVLQQNLGARHQQAGGAAGFQPPSSPYDEVELDALAEIERIER
EAASEKCSKEVQDKDKPLKKRRQDSFPLEPGAGGPGGPTGAPGSGPAGGGNAGKLTPQEA
TAAGNGASRPPLMVSIDLQQAGRADGQLDPCLAAPVPALEAQRWPEEPACGPAAVEGSDT
ALRLKPDGRPEVIKNRVDKHDGRRDIRESSKHRHDDKSSDRRAEMPKSSGRGEHGRDRDR
ESDKDRRHRSETGDTRSRSDRDRFGFRASSVGEPGRSSHRQDALKPAAAPSGAKLPDSFP
AHLLGGQSDALKNFQIPKIKRDMHCGAPPESPMWGQPKVKLERLGLVQDFEKRPRPVVVL
KKLSVDQIQRIIRHSRTGKNRFSPGKYGKSGMDPAILKELPPELLAEIESTMPLCERVKM
NKRKRSTTNEKPKYAEVSSDDDANGESARKRHRRDKDRTWDFEERERRFSGEHRRSSVKE
GRRGSGSRYRDSSEDDSPPPSISDVARKLKMKEKQKKRKAYEPKLTQEELMDSSTFKRFS
NSIDNILENLEDVDFTTMAADDDEIPQELLLGKHQLNELGSESAKIKAMGITGRIPSDKL
VKLLNILEKNIQDGAKLSTMINHDHDAEDEERLWRDLIMERVTKSADACLTALNIMTSAH
MPKAVYIEDVIERVLQYTKYHLQNTLYPQYDPVYRVDPHGGILLSSKAKRAKCSTHKQRV
IIMLYNKVCDVVSNISELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVF
SRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDQDGEPMYIQMVTALVLQLIQCVV
HLPNDKDIFEEHDSMVDQDVLITNSYETAMRTAQNFLSVFLKKCGSKQGEEDYRPLFENF
VQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAARLRKDAV
TSKMDQRSIDRILQQSQGSDETQQLQKALLDYLEDNADTDASLVFARKFYIAQWFRDATT
EAEKSMRNQNPKEDDSSDGPQHAKEMETTGEIMQRAEKRKKFLRNIIKTTPAHFATLKMN
SDTVDYEDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEVVAVDP
SILARSDMQRGVHGRLMDNSTSVREAAVELLGKFVLSRPQLTEQYYDMLIERILDTGISV
RKRVIKILRDICLEQPTFSKITEMCVRMIRRVNDEEGIKKLVNETFQKLWFTPTPAHDKE
TMTRKILNITDVVAACRDTGYDWFEQLLSNLLKSEEDAAYKPAKKACVQLVDNLVEHILK
YEESLAESRGVNSTRLVACITTLYLFSKIRAQLMVKHAMTMQPYLTTKCNTANDFMVICN
VAKMLELVVPLMEHPSETFLATIEEDLMKLIFKYGMTVVQNCVSCLGAVVNKVTHNYKFA
WACFNKFYSTLNRLKSQHQEDPNSTTLAANKPVILRALFTVGALSRHFDFDLEEFKGPSK
IIIKDKVLELLLYFTKHEDEKVKTKAINGLGFLMIMHPSQMFVPEVKALYNGILADSTSS
INLKINILKNLQTYLQEEDTRMQEADREWKKLSKQEDLKEMGDISSGMSSSIMQLYLKQV
LEAFFHSQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPTMRNKADQQLVEID
KKYTGFIHMKAVAGMKMSFNLQQSIEMSRKTIIRGFRQDETHSALCSHLFTMIRTNRQHR
RAFLISLLNLFDDSAKTEVNMLLFIADNLAYFPYQSQEEPLFIMHHIDICLSVSGSNLLQ
TFTELLLKEPRRKEKVKVKVKEWKSTSDGEDDGERMNCISPGSDKGHNSEDDDVVQMPKK
PRKPVADSDNSESESDLDDLNVDDTERVMRRLPDNPASLLDFANSVQGILLLLVLKQHLK
NQYGFSDGKIQKYSPTESAKVYDKAVNRKVSIYFHPRQTLDFIANNMARATLTEDVKRRI
VKQYLDFKVLMEHLDPDEEDEEGEASASANIRNKAINALLGGSGPLLGPSPRNQAGPETD
DDYSDSDERTPGSSRKSRRSGDPSDPGRMSETVDVMDVIALCCPKYKDRPQIARVVHKTP
NGYAIHWMAGSYSGPWAEAKKRDGRKLVPWVDTIKESDVIYKKISLTSNHKLSNKVVQTL
RSLYAAREGGAS
NT seq
7599 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactcttgctgggatcgctagcctgaca
gacttgttgaaccagcttccccttccgtcccccctccccgccaccaccactaagagcctc
ctgtacaatgggaggatcgcagaggaggtcacctgtctactgggttgccgggacgaaaac
ctagctacccagcttgcccatggcctcaaccaggtttccacagagcacatagagctaaag
gacaacctgggaagcgatgagcccgagggagacgcgccactgctgctgcagaccatgctg
gccagaaaccctggcatcttcagggaaaaaaatgttatgcagcagccgatggtacaacag
tacaagatcacccaaaattccatgcatagtccggcccagtcggcaaatttccagccggcg
gcaatttctcccaatccttcaagtcgttttgtgcccccccagactggctctagtagtaga
tacttgggccagcaaaacagtccagttcccagtccatacacaccccagagccccgcccct
ggttacatccagcagtacccccaccaacaaccacccagctacaaccaacatcaacagata
cagcaagtgtctgtggccagtccaatggttccgggaagtatacgaaacatccacgaaggc
aaggtatcaggtatcaatgctgccaaccatcacccagacaggcatggcactgacgactac
ttgaacatcgtgcaccggctcggcagtgaggagggggactccgccttgagaaatccgtcg
ttccctctgaggtcgccgcagtccggctgctccccagcagcgggtgaagggacacctaaa
ccgggttcccgtcctccgctgattctgcagtcgccacctccgtatgcgccgtcgccgagg
gaggggggactcgaccagaaacagcatcttcagcaacgcaggaagattcccgctgtgaaa
gaagagaaagacatgtatgacattgtcagctcgccaaacaaggactccaccaaactcacg
ctcaagttgtcccgggtcaagtcgaatgagtccgatccatcaggtgacactgtgccaggc
atggaccacaactcagacaatatggaggcggaactgggcttccagcaggtgcctgttctc
cagcagaacctgggagcccgtcaccagcaggccgggggtgccgctggtttccagcctcct
agttccccttatgatgaggtggagctcgacgccctggctgaaatcgagcggatagagcga
gaggcggcaagcgagaagtgttctaaggaagtccaagataaagacaagccactgaaaaag
aggagacaagactcttttcccttggagcccggtgccgggggacccggtggtcccactggg
gccccaggaagcggacctgcaggagggggcaatgctggcaaactgaccccgcaagaggcc
acggcagcaggcaacggtgccagtcgtcctcccctcatggtgagcatcgacctccagcag
gcagggagagctgacggccagcttgacccctgtctggctgcccctgtcccggccctagag
gcccaacgctggcccgaagaacctgcttgcgggcccgctgccgtagaaggttctgacact
gccttgcgtttgaaaccggacggacgaccagaggtcatcaagaacagggttgataaacat
gatggcagaagagacattcgggagtcgtccaaacacagacacgatgacaagtcttcagac
aggcgggcggagatgcccaagtcgtcgggccgaggggaacatggacgggacagggacagg
gaatctgacaaagataggaggcatcggagcgaaaccggcgatacccgttcgagaagtgac
cgagatagattcggctttcgggcatcctctgtcggagagcctggtcgtagcagccatagg
caagacgctctcaagccggctgctgcgccatctggcgctaagcttccagattctttcccc
gctcacctcctgggaggacaaagtgacgcactgaagaacttccagatccctaagattaaa
cgtgacatgcattgtggcgctccacctgaaagtcccatgtggggccagccaaaggtgaaa
ctggagcggctgggtctggtgcaggactttgaaaaaaggccgaggcctgtggtggttttg
aaaaagctttcggtggaccagatccaaagaatcattcgtcacagtaggaccgggaagaac
cgcttctccccgggaaaatatggcaaaagcggcatggatccggccattttgaaggaactg
ccgccagagttgctcgcggagattgagtcgaccatgcccctttgcgaacgagtcaaaatg
aacaagaggaaaaggagtacgaccaacgagaagcccaaatacgctgaggtcagctcggat
gacgatgcaaatggagaatccgctaggaagcgtcatcgtcgggacaaagataggacatgg
gactttgaggaaagagaacgacggttctcgggcgaacaccggagaagtagtgtcaaagag
ggccggcgagggtcaggcagccgttaccgggactcgtccgaagatgattcgcctcctccc
agcataagcgatgttgccaggaaattgaagatgaaggagaagcagaagaagcggaaagcg
tacgaacctaagctcacgcaagaggaactgatggactcgtccacgttcaaaaggttctca
aacagcatagacaacatcctggagaacctggaggatgttgatttcaccaccatggcagca
gacgatgatgagatacctcaggaattgctacttgggaaacaccaattaaacgagctgggc
agcgaatctgccaaaatcaaagccatgggcatcaccggcaggatcccatcagacaagttg
gtgaagttgctcaacatactagaaaagaatatccaggatggagccaagctctctaccatg
atcaaccatgaccacgatgcagaggatgaggagaggctctggagggacctcatcatggag
cgagtgaccaagtcagctgacgcctgcctcacggccctgaacatcatgacatcagcgcac
atgccgaaggccgtgtatatcgaggacgtcatcgagcgggtgctgcagtatacaaagtac
catctccagaacacgctctatccccagtatgacccggtctacagggtggacccgcatggg
ggtatcttgttaagctccaaggcgaagcgtgccaaatgctccacacacaaacagcgtgtc
atcatcatgctctacaacaaagtgtgtgatgtcgtaagcaacatctctgagctcctcgag
atccagctgctcactgacaccaccatcctccaggtttcttcaatgggaatcacgccattc
tttgttgaaaatgtcagtgagctgcagctgtgcgccattaaactggttacagcggtgttc
tcgcgttacgagaagcatcggcagctcattctagaggagatcttcacgtcactggccagg
ctgcccaccagcaaacgctccctcaggaatttccggttgaacagctcggaccaggatgga
gaacccatgtacatccaaatggtgactgccttggtgttgcagctcattcagtgtgtggtc
cacctacccaacgacaaagacatttttgaggagcatgacagcatggtggaccaagatgtg
ttgattaccaactcgtatgagacggcaatgcgaacagcgcagaacttcctttctgttttc
ctcaaaaaatgtggcagtaagcaaggagaggaagattaccggccgctgtttgagaacttt
gtccaggacctcctctcgacggttaacaaaccagagtggcccgccgccgagctgctactc
agtctgctcggcagactcctggtacaccagttcagcaacaagcagacagagatggcactc
cgagtggcgtctcttgactacctcggtacagtggccgctcgcctgaggaaggacgcagtc
actagcaagatggaccagcggtcgattgatcgtattctacaacagtctcagggtagtgat
gaaacccagcaactgcaaaaggctctactggactatttggaagacaatgctgatacagat
gcctccctcgtgtttgcaagaaagttctacatcgcccagtggttccgggacgccacaaca
gaggcggagaagtccatgcggaatcagaacccaaaggaggatgactcctcagatgggcca
caacacgccaaggagatggagaccacgggtgagatcatgcagcgtgctgagaagcgcaag
aagttcttgcgcaacatcatcaaaaccacgccagctcatttcgccacactaaagatgaac
tctgacactgtggactacgaggactcctgtctgattgtgcgttatttggcctccatgagg
ccgtttgcacaaagctttgatatttatttaacacagatattgcgagtccttggagaaagt
gccatagctgtgaggactaaagccatgaagtgtctgtcagaggtggtggctgtagacccc
agcatcctggcgaggtccgacatgcagcgcggagttcacggccgcttgatggacaattcc
acaagtgtgagagaggcagccgtggagctgctgggaaagtttgtgcttagcagaccgcag
ctcaccgagcagtactatgacatgctcatagagaggatcctggacacaggtatcagtgta
aggaagcgagtgattaagatcctgcgagacatctgtttagagcagcccaccttcagtaaa
atcacagagatgtgcgtcagaatgattcgcagagtcaatgatgaggaagggatcaagaaa
ttggtgaatgagacattccagaagttatggttcactcctacgccggctcacgacaaggag
accatgaccagaaaaattctcaacatcaccgatgtggtcgcggcctgtcgtgacaccggc
tatgactggtttgagcagcttctttccaatcttctcaaatccgaggaagatgcggcgtat
aaacctgccaaaaaggcctgcgttcagctggtggacaatctggtggagcacatcttaaaa
tacgaagagtctctcgcagagagcaggggtgtgaactccacccgcttagtggcctgcatc
actaccttgtacctgttcagtaagatcagggcccaacttatggtcaaacacgccatgacc
atgcagccttacctaaccaccaagtgtaatactgccaatgacttcatggtcatttgcaat
gtggcaaagatgttggagctggttgtgcctctgatggagcaccccagcgagacgttcctc
gccaccatagaagaggacctcatgaagctcatcttcaaatatggcatgactgtggtgcag
aactgtgtaagctgtttgggcgctgttgtcaacaaagtgacacacaactacaagtttgcc
tgggcctgcttcaacaaattctatagtacacttaataggctgaaaagccagcatcaagaa
gatcccaacagcacaacgttggcagcaaacaagcctgtaatactgcgagcgttgttcact
gtgggtgctctgagtcgacactttgattttgacctggaggagtttaagggcccgtcaaag
atcattatcaaggataaggttctggagcttcttctatacttcactaagcatgaagatgag
aaagtcaagaccaaagctatcaatggcttaggcttcctcatgatcatgcatcccagccaa
atgtttgtgcctgaagtgaaggccttgtacaacggcatcctagctgacagtacctcatcc
atcaacctcaaaatcaacatcctcaaaaacctccaaacgtacctccaggaggaagacaca
aggatgcaggaagctgatcgagaatggaaaaagctttctaaacaggaggatctgaaggag
atgggagatatctcttcagggatgagcagctccattatgcaactgtacctgaagcaggtt
ttggaggccttcttccactcgcagtccagtgtacggcactttgcgctcaacgtcatcgca
ctcacactgaaccagggactcatccatccggtgcagtgtgtgccgtacttgattgcaatg
ggaaccgacccggagcccaccatgaggaacaaagccgatcagcaactggtagaaatcgac
aagaagtacacaggttttatccatatgaaggctgtggctgggatgaagatgtcattcaac
ctgcagcagtccatcgagatgtctcggaagaccatcattagaggtttcaggcaggacgag
acccactcggcgctctgctcccatcttttcaccatgatccgcaccaaccggcaacaccgg
agggccttcctcatctcgctgctgaatctttttgatgacagcgccaagactgaggtcaac
atgttgctgttcatagcggacaacctagcctacttcccgtaccagagccaggaggaacct
ctctttatcatgcaccacatagacatctgcctgtcagtttctggtagcaatcttcttcag
accttcacagagcttctgttaaaagagccaaggcggaaagaaaaggtgaaggtgaaggtg
aaggagtggaagagcacatcagatggggaggatgatggggaaagaatgaactgcatctcc
cctgggagcgacaaggggcacaacagcgaagacgacgacgtggtgcagatgccaaaaaag
cccagaaaaccagtcgctgactcagacaactctgagtccgaatcagacctcgacgatttg
aacgtggacgatacagaacgagtcatgaggcgtctccccgacaatcccgcgagcctcttg
gactttgccaactctgttcaaggcatcctattgctgctggtgctcaaacagcatctgaag
aatcagtatggattctcagacggtaaaatccaaaagtactccccaacggagtcagctaag
gtgtacgacaaggcagtgaaccgaaaagtcagcatttacttccacccacgacaaaccctt
gacttcatcgccaacaacatggcgcgcgccacgctaacagaagatgtcaaacgccgtatt
gtcaaacagtacctcgactttaaggttctgatggaacatctggacccagacgaggaagac
gaagaaggagaagcgtcggcaagcgccaacatccgaaacaaagccataaatgccctgctg
ggaggctcgggacccttgttgggacccagtccgcgcaatcaggcagggccagagacagat
gacgactacagcgacagtgacgagcggactccagggtcttcccggaagtcgagacgatcg
ggcgacccgtcggatccgggccgaatgagcgagacggtggacgtgatggacgtgatcgct
ctgtgctgccccaagtacaaggaccggccgcagattgcccgcgtggtccacaagactccc
aatggctacgccatccattggatggctggctcctactcggggccatgggctgaggccaaa
aagcgcgacggccgcaaactggtgccttgggtggacactatcaaggagtcggacgtcatt
tacaagaagatttccttgaccagcaaccacaaacttagcaacaaagtagtgcagacttta
cgatcgctgtacgcagcacgggaaggaggagcgagctaa
DBGET
integrated database retrieval system
