Syngnathus scovelli (Gulf pipefish): 125993711
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Entry
125993711 CDS
T08785
Symbol
unga
Name
(RefSeq) uracil-DNA glycosylase isoform X2
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125993711 (unga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125993711 (unga)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
125993711 (unga)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125993711 (unga)
Prokaryotic type
125993711 (unga)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
125993711
NCBI-ProteinID:
XP_049618483
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All DBs
Position
3:16610874..16613614
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AA seq
300 aa
AA seq
DB search
MIRQKTINSFFMRTSKKLSCKVSNEPERNAKDSKKRKFSAVDPEPSNPPSASLSQEQMDM
IARNKKAALVKLYSSQTPHGFGESWQKALAAEFGKPYFKQLLQFVNNEREHHTVYPPAEH
VFTWTQMCELRDVKVVILGQDPYHGPNQAHGLCFSVKRPVPPPPSLENMYKELGNDIEGF
QHPKHGDLSGWAKQGVLLLNAVLTVRAHQANSHKDKGWETFTDAVVHWLSNNLEGLVFIL
WGAYAQKKGATIDKKRHHILKAVHPSPLSAHRGFFGCKHFSKANELLIKSGKSPVDWKAL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgattaggcagaaaactatcaattcatttttcatgcggacctccaaaaagttgtcttgc
aaagtttcaaatgaaccggagcggaatgctaaagactcgaagaagcgcaagttctcggcg
gttgatccggagccctccaacccaccgtcggcttccctgtctcaagagcagatggacatg
atcgcccgtaataagaaggcggcgttggtgaagctctattcgtctcagacccctcacggg
tttggagagagttggcaaaaggcgctggctgctgaatttgggaaaccttactttaaacaa
ttgctgcagtttgtcaacaatgagagggaacatcacactgtgtacccacctgctgagcat
gtcttcacctggactcagatgtgtgaacttcgtgatgttaaagtggtgatcctcggtcag
gacccgtaccatggtccaaaccaagcccatggattatgttttagtgtcaaaagaccagtg
cctcctcctcccagtttggagaacatgtacaaagagctagggaatgacattgaaggcttc
cagcacccaaagcatggagatctcagtggctgggcaaaacaaggtgtgttgttgctcaat
gccgtgttgaccgtgcgagcacaccaggccaactcgcacaaagacaagggttgggagaca
ttcaccgacgcagttgtgcactggctcagcaataacttggagggcctcgtattcattctg
tggggggcctatgctcagaagaagggggccacaattgacaagaaacgtcaccacatcctg
aaggcagtgcatccttctcccctgtctgctcatcggggattctttggctgcaaacatttt
tccaaagccaacgagctgctgataaaatctggaaagtcacctgttgactggaaggcactt
taa
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