Syngnathus scovelli (Gulf pipefish): 125993765
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Entry
125993765 CDS
T08785
Name
(RefSeq) homeobox protein orthopedia B isoform X1
KO
K24901
homeobox protein orthopedia
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125993765
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
125993765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
TFIIA
Motif
Other DBs
NCBI-GeneID:
125993765
NCBI-ProteinID:
XP_049618591
LinkDB
All DBs
Position
3:complement(19778293..19782679)
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AA seq
330 aa
AA seq
DB search
MLSHADLLDARLGEFSALNPGAKLHWMKDAAELLGHREALKCRLGGGVPDQGHPGDMAPG
SDSVEGATLLPGEDITTVGSNSAGMPVNGKEPEKQQQQQQQQQQPQQSSGGQSSQQKQKR
HRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTT
NVFRAPGTLLPTPGLPQFSAAAMENSLCSFHANDSRWATGMPGVSQLQLPPALGRQPPGM
AQSLSQCSLGHGPPPNSMGLSNGLSSNGSGLQSHLYQSPFPGMSASLSGPTNVSGSPQLC
SSPDSDMWRGTSIASLRRKALEHTVSMSFT
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgctctcccacgccgacctcctggatgctcggctcggtgagttctcggcactaaacccg
ggagctaaactccactggatgaaagatgctgcagagttactcggacaccgagaagctctc
aagtgtcggctgggcggcggggtgccggaccagggtcatccgggagacatggcccccggt
tcggactccgtggagggagccactctcttgcccggtgaagacatcaccaccgtgggatcc
aactcggccggtatgccggtgaacgggaaagagccggagaagcagcagcagcagcaacaa
cagcagcagcagccccagcagagctcgggcgggcagtccagtcagcaaaaacagaaacgg
caccgaacccgcttcacgccggcgcagctcaacgaactggagcgcagcttcgccaagact
cactacccggacatcttcatgagggaggaactggccctcaggatcggtctcaccgagtcc
agagtccaggtgtggttccagaaccggcgcgccaagtggaagaaaaggaagaagaccacc
aacgtgttccgcgccccgggcacgctgctgcccacgccgggcttgccgcagttctcggcg
gccgcaatggagaacagcctgtgctcgttccacgccaacgactcgcgctgggccacgggc
atgccgggcgtgtcgcagctgcagctgcccccggctctgggccgccagccgccgggcatg
gcgcagtcgctgtcgcagtgcagcctgggccacgggccgccacccaactccatggggctg
tccaacggcctctcgtccaacggctccggcctgcagtcgcacctctaccagtcgcctttc
cccggcatgtcggcgtcgctctccggacccacgaacgtatcgggctccccgcagctatgt
agctccccggacagtgacatgtggagagggaccagcattgcttcccttcggcgcaaggcg
ctcgagcacacagtgtccatgagcttcacttag
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