Syngnathus scovelli (Gulf pipefish): 125993770
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Entry
125993770 CDS
T08785
Symbol
cyfip2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04810
Regulation of actin cytoskeleton
sscv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125993770 (cyfip2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125993770 (cyfip2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125993770 (cyfip2)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125993770 (cyfip2)
Factors involved in mRNA localization
Other mRNA localization factors
125993770 (cyfip2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
125993770
NCBI-ProteinID:
XP_049618642
LinkDB
All DBs
Position
1:complement(18660329..18680084)
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIREDHIRFIS
ELARYSNSEVVTGSGLDSQKSDEEYRELFDLSLRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKTVCDWEGAREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVVAIEDFHKQSFFF
THLLNFSEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLDH
AISRFESEDLTSIVELEWLLEINRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTVLQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALVSQEEVCD
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL
TKERLCCGLSMFEVILTRIRSFLQDGVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIP
VGTHEYTAEQCFGDGLNWAGCAVIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
KKMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccacgtgaccctggaagatgccctatccaatgtggacctgctggaggaactg
cccctcccagaccagcagccatgcattgaaccccctccctcctccattatgtaccaggcc
aattttgataccaactttgaagataggaacgcgtttgtgactggcatcgctcgttatatt
gagcaagctacagtccactccagcatgaatgaaatgctggaagaaggacatgagtatgca
gtgatgctttacacttggagaagctgctctcgagctattccgcaggtgaaatgcaacgag
caacccaacagggttgagatctacgagaaaacagtggaagtgttggagccagaagtcacc
aagctcatgaagtttatgtacttccaacggaaagctatagaacgtttctgtagcgaagtg
aagcgtctctgccatgctgagagaaggaaagactttgtttctgaggcctatctgctcact
ctgggaaaatttatcaacatgtttgctgtactggacgaactgaaaaacatgaagtgtagc
gtaaagaacgatcattctgcttataaaagggctgctcagttcctgaggaagatggctgac
cctcagtccatccaggaatctcaaaatctttcaatgttcttagctaaccacaacaggatc
actcagtgcctgcaccaacagttggaagtgattccaggttatgaagaacttttggcagat
attgtcaacatctgtgtagattattatgagaacaagatgtatttgactccaagtgagaag
cacatgcttctcaaggtgatgggctttggtctgtacctgatggatggaaatgtgagtaat
atctacaaactagatgccaaaaagaggatcaaccttagcaagatcgacaagttctttaaa
cttcaagtggtgccactctttggagacatgcagatagagttgtcccgctacattgagaca
agtgctcactacgaggaaaacaagtccaaatggacgtgcacccagagcagcatttcacca
cagtacaacctatgtgagcaaatggtgcagatcagagaggaccacattcgcttcatctct
gagctggcgcgctatagcaacagcgaagtggtgacgggctcaggtctggacagccagaaa
tcagatgaggaatacagagagctttttgacctttcactgaggggtctgcagttgttgtcc
aagtggagtacgcatgtcatggaagtttattcatggaagctggtccatcccacagataaa
ttttgtaataaggactgtccgggcacagcagaggagtatgaacgagccacacgttataat
tacaccagcgaggagaagtttgctctggtggaagtgattgccatgattaaaggccttcag
gtcctgatgggccgaatggagtccgttttcaatcaggctatcaggaataccatctacgca
gctctgcaggactttgcccaaatgacactccgagagcctctgcgccaagctgtgcgcaag
aagaagaatgtcctcattagcgttcttcaagctattcgtaaaaccgtttgtgactgggag
ggggcgagggaacctccaaatgatccgtgtctgaggggggagaaggaccctaaaggaggt
tttgatatcaaggtgccgcggagagctgtgggaccgtctagcacacaactgtacatggtg
cgcactatgttggagtcattgatcgctgacaagagtggctctaaaaagaccctgcgcagc
agtctagatggacccattgtggtcgccatagaagactttcacaaacaatccttcttcttc
acacacttgctcaacttcagtgaggccctgcagcagtgttgtgacttgtcccagctctgg
tttagagaattcttccttgagctgaccatgggtcgcagaatccagttccctattgagatg
tccatgccatggattctcactgaccacatcctggagaccaaggaaccatcaatgatggaa
tatgtgctgtatccactggatttgtacaatgacagtggctactatgctctcacgaagttc
aagaagcagttcctttatgatgaaattgaggcagaggtaaacctttgctttgatcagttt
gtctacaagttggctgatcagatatttgcctactacaaagcaatggctggcagtgtcctg
cttgataagcgcttccgggcagaatgtaaaaactatggcgtgattataccataccctcct
tcaaaccgctatgagacgttgctaaaacagagacatgtgcagcttctgggtcgctccatt
gacctaaaccgtcttatcacccagaggatctctgctgccatgtataaatctctggatcat
gccatcagccgctttgaaagcgaggatctcacatctattgtggagttggagtggcttctg
gagatcaacagactcacccaccggcttctgtccaagcacatgactctggacagctttgat
gccatgttccgtgaggccaatcacaacgtctcagctccctacggtcgaattacacttcat
gttttttgggagctcaatttcgatttcctccctaattattgctacaacggatccacaaac
cgatttgtacgcacagccattcctttcacccaagagcctcagagagacaagccagccaat
gtacagccttactacctgtatgggtccaagcctctgaacattgcctactctcacatatat
agctcgtacaggaactttgttggcccacctcatttcaagactatttgtcgtcttcttggt
taccaaggcattgctgttgtgatggaggagctgctaaagattgtcaagagcttgttacag
ggcaccgttctgcagtatgtaaaaacactcatcgaagttatgcccaaaatctgtcgccta
ccccgccacgagtatggctccccagggatcttggagttcttccaccatcaactcaaggat
attattgagtatgctgagctcaagacagatgtcttccagagcttgagggaggtggggaac
gccatcctcttctgcctgctcatcgagcaagctctggtgtcacaggaagaagtgtgtgac
cttcttcatgctgcccccttccaaaacattctgccgagagtatacatcaaagagggagag
cgtctggaagtgaggatgaaaaggctcgaagcaaagtatgcccctcttcaccttgtgcct
ctgattgagaggctggggacccctcagcaaattgccattgcacgtgagggagatttgctg
accaaagagcgcctgtgctgcggcctttccatgtttgaggtcatcctgacccgcatccgg
agctttttgcaagatggggtgtggcgcgggcctcctcccaccaatggtgtcatgcatgtc
gatgagtgcatggaattccaccgcctctggagtgcaatgcagtttgtgtattgcattcca
gtgggcactcatgagtacacagcagagcagtgctttggggatggtctgaactgggccggc
tgtgctgtcattgttctgttgggacagcaacgtcgttttgatctctttgacttctgctac
cacctgctcaaagtccaaagacaagatggcaaggatgagatcatcaaaaatgtgccacta
aagaagatggcagaccgcatcaggaagtaccagattcttaacaatgaaatctttgctatc
ctaaacaagtacatgaaggctgtggagacagacagttccactgtggagcatgttcgctgt
ttccagcctcctatacaccaatccctggctaccacttgttga
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