Syngnathus scovelli (Gulf pipefish): 125993794
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Entry
125993794 CDS
T08785
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125993794
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
125993794
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
125993794
NCBI-ProteinID:
XP_049618652
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Position
3:25348089..25351376
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AA seq
580 aa
AA seq
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MEAALGSCGSPPSFPVGRRSPVPSLVHVPTPEMKRKKKKSTQEDHGLLPAHKRTKKRKET
GEGRDQEDGIPAAAKPRKKKRDKRDPVAAAVEKAEAELEDQKDDDGVFPAEALARKAKKR
RKEKIREADNDDDRVPPADVRKKKRKRAEESLLVADGETEESVAVAADGHQLDRADSLDS
RLVAELEEFVPNVRKRAESEIKTLLRHDLERFRVFREQGLRVRWGRFTHEENVRIRENVA
RFLAVTGIASADQLLFPHRYEELRADIKRLKKQHGFLEAIAEGIPRPCKQVVTRAVKLDD
MNHMGEFTEEELDRLVKLHTLHGNDWSTIARKMGRSKFALQKRFVSIATGRGLWTSEEEN
RLEEVVKAHLEALVQGAAGDARLTLRQLCARLPWTEISQHVRTRCWTQCRVKWFCILQAR
LSQKNPRKPPEGLRTRLHLINTLYALNIEDACDIDWDTVSSILGGVTPLCVQKLFRSLKV
RNVPDWSRLSYGEIIDFLQEHVTPRLEERLRRYDKWRQEDEAERLATLDDSYSLSDIFVD
GEDGHLLEVDNTRPSRGRSKCRREWPEAQPTLEPAATPQP
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcgttgggctcatgtggctcgccgccgtcgtttccagtcggccgccgctcg
ccggtgcccagcctcgtccatgtccctacgcccgagatgaagaggaagaagaaaaaaagt
acacaagaggaccacggccttcttccggctcacaaacgcacaaagaagaggaaagagacg
ggagaaggaagagaccaagaggacgggattcctgccgccgcaaagccgaggaagaaaaag
cgagacaaacgagacccggtcgctgcggctgtggagaaggcagaagcagaactagaggac
caaaaagatgacgacggcgtctttcccgccgaggcgctcgcccgcaaagccaagaaacga
agaaaggagaaaatcagagaagcggacaatgacgacgaccgtgttcctcctgccgacgtg
cgcaaaaagaagcgcaagagagcagaagaaagcctccttgtcgctgacggcgagacggag
gagagcgttgccgtggccgccgacggacaccagcttgaccgagctgacagcttggactcc
cgtttggtggctgagttggaagagtttgttcccaacgtgaggaagagagccgagtccgag
atcaagacccttctgcgtcacgacctggagcgcttccgagtcttcagagagcaaggcctg
cgcgtgcgttggggccgcttcacgcacgaggagaatgtgcgcatccgagaaaacgtggcg
cgcttcctggcggtgacgggcatcgcctccgccgaccagcttctcttcccgcatcgctac
gaggagctgcgggccgacatcaagaggctgaaaaagcaacatggcttcttggaggccatc
gccgagggaatccccagaccgtgcaagcaggtggtgacccgggccgtcaagctggacgac
atgaaccacatgggagagttcaccgaggaggagctggatcgtctggtcaagttgcacacg
ctccacggcaacgactggagcaccatcgccaggaagatgggccgcagcaaattcgccttg
cagaagcgcttcgtcagcatcgcgacgggccgaggcctgtggacgtcggaggaggagaac
aggctggaggaggtggtcaaggctcacctggaggcgctggttcaaggagccgccggagac
gcccgtttgacgctgcgtcagctttgcgcgcgtttgccctggacggagatcagccagcac
gtgcgcacccgatgctggacccagtgtcgcgtcaagtggttctgtatcctgcaggcccgg
ctgtcgcagaagaaccctaggaaacccccggagggactgaggaccaggctccacctgatc
aacacgctgtacgctttgaacatcgaggacgcttgcgacattgattgggatacggtttcc
agcatcctgggcggcgtgactccgctctgcgttcagaagcttttccgaagcctcaaagtc
cgcaacgttcccgactggtctcggctctcctacggagagatcatcgacttcctgcaggag
cacgtgacgccgcgtctggaggagcggctccggcgctacgacaaatggcggcaggaggac
gaggcggagcgcctggcgaccctcgacgactcgtactctctgtcagacatcttcgtggac
ggagaagacggccatttgctggaagtggataacactcggccgagcagaggccgatccaag
tgcaggagggagtggcccgaagcgcagcccacgcttgagcccgcggcgacgccgcagccc
tga
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