Syngnathus scovelli (Gulf pipefish): 125993798
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Entry
125993798 CDS
T08785
Name
(RefSeq) far upstream element-binding protein 3 isoform X1
KO
K13210
far upstream element-binding protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125993798
03041 Spliceosome [BR:
sscv03041
]
125993798
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125993798
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125993798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Secretin_N
FUBP_C
Motif
Other DBs
NCBI-GeneID:
125993798
NCBI-ProteinID:
XP_049618655
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All DBs
Position
3:25334037..25340459
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AA seq
554 aa
AA seq
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MAELVQAGGQASIGQPALKSDGLADALQRARQMVGKMGEAVPHMDGSPASAEPSLYYKRD
DAGSQVSAGGHQRVLTEDYKVPDRMVGFIIGRGGEQITRIQLESGCKIQIAADSGGLLER
PCSLTGTPECIEQAKRLLVQIVERCRNGPGFPGDLDGGALVQEMLIPASKVGLVIGRGGE
TIKQLQERAGVKMMMIQDGPMPTGADKPLRISGDPYKVQVAKELVLEVIREKDGDFRGGR
GDFSARPGGAGLDVPVPRFAVGIVIGRNGEMIKKIQNDAGVRVQFKTDDGVSPERVAMVM
GQPERCQHALHLINELIRTAQERDGFGSALRANRARGRGDWTMGSPGPLQEVTYTIPADK
CGLVIGKGGESIKSINQQSGAHVELQRNPPPSTDPNARVFTIRGSAQQMEHARQLIDDKI
GGSGIVSNGGFGFGPFAQGPAHQNCGAAQTFLTGVWGNTYQTGWQNATQQDPGNAPAHRP
AISVATPHLRAPVRAGPQGQPAGVMSDYGKAWEDYYKKQSQSSQQSSLPDYTAALAEYYR
QQPYLWNPAQIQDH
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggtgcaggctggaggacaggcctcgatcggccagccggcgctcaagtcg
gacggcctggccgacgcgctgcagcgggcccgccagatggtgggaaagatgggcgaggcg
gtgccgcacatggacggctcgccggcgagcgctgagccgtcgctctattacaagcgagac
gacgcaggtagccaagtgtcagcagggggccaccaaagggtgctgacggaggactacaag
gtccccgacaggatggtgggcttcatcattggccggggcggcgagcagatcaccaggatc
cagctggagtcgggatgcaagatccagatcgccgccgatagcggcggtctgctggagcgg
ccctgttccctgaccgggacgcccgagtgcatcgagcaggccaagcgtctcctggttcaa
atcgtggagcgctgcaggaacggccccggcttccccggcgacttggacggcggagccctg
gtgcaagagatgctgatcccggccagcaaggtggggctggtgatcggccgggggggcgaa
accatcaagcagctgcaggagcgcgccggtgtgaagatgatgatgatccaagacggtccc
atgcccacgggagcagataaacctctccgcatctccggcgacccgtacaaggttcaggtg
gccaaggagctggtgctggaggtgatccgggagaaggacggcgacttccgggggggacgc
ggcgacttctctgcccgaccgggaggagccggccttgacgttcccgttccaaggtttgcg
gtgggcatcgtcatcggccgcaacggcgaaatgatcaagaagattcagaatgacgctgga
gtgcgcgtccagtttaaaacagacgacggcgtcagtccggagcgcgttgccatggtgatg
gggcagccggaacgctgtcagcacgcgctgcatctcatcaacgagctcatccggacggcg
caggagcgcgacggctttggctcggcgctgagggccaaccgggccagaggccgcggggat
tggaccatgggttcccccggacccctgcaggaggtcacctacaccatcccggcggacaag
tgcggcctggtcatcggcaaaggtggcgaaagcatcaagagcatcaaccagcagtctggc
gcccacgtggagctccagaggaacccgccgccctctaccgaccccaacgcccgcgtcttc
accatccggggctcggcgcagcagatggagcacgcccggcagctcatcgacgacaaaatc
gggggttccggcatcgtgagtaacggaggattcggcttcggcccctttgcgcaaggcccc
gcccaccagaactgcggcgctgctcagaccttcttgacgggcgtgtgggggaacacctac
cagacgggctggcagaacgccacgcagcaggaccccggtaacgcgcccgcgcaccgaccc
gccatctccgtagcaacgcctcatcttcgtgcccccgtgcgtgcaggtccgcagggccag
cccgccggcgtgatgagtgactatggcaaagcgtgggaagactactacaagaaacaaagt
cagtcgtcccagcagagttcgctgcccgactacacggcagcgctggctgagtattaccgc
cagcagccctacttgtggaaccccgcccagatccaggatcactag
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