KEGG   Syngnathus scovelli (Gulf pipefish): 125993831
Entry
125993831         CDS       T08785                                 
Symbol
cldn5a
Name
(RefSeq) claudin 5a
  KO
K06087  claudin
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03272  Virion - Hepatitis viruses
sscv04382  Cornified envelope formation
sscv04514  Cell adhesion molecule (CAM) interaction
sscv04530  Tight junction
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    125993831 (cldn5a)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    125993831 (cldn5a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    125993831 (cldn5a)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    125993831 (cldn5a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sscv03037]
    125993831 (cldn5a)
   04147 Exosome [BR:sscv04147]
    125993831 (cldn5a)
Cilium and associated proteins [BR:sscv03037]
 Other cilia and associated proteins
  Stereociliary proteins
   125993831 (cldn5a)
Exosome [BR:sscv04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   125993831 (cldn5a)
  Exosomal proteins of colorectal cancer cells
   125993831 (cldn5a)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Clc-like Myelin_PLP
Other DBs
NCBI-GeneID: 125993831
NCBI-ProteinID: XP_049618742
LinkDB
Position
3:25081634..25083410
AA seq 215 aa
MVSAGLEILGLSLCVVGSLLVMVACGLPMWKVTAFIEANIVVAQTIWDGLWMSCVVQSTG
QMQCKVHDSVLSLSHDLQAARALTIIASVMGVLGLMVVIAGAQCTNCIRNDYVKARVVNA
GGVIFISSGLFVLVPLCWMANNIISDFYNPQVPGSKKREIGAALYIGWAATALLFIGGAV
LCCSCPSGGNAGYSVKYAPTKRATPNGDYDKRNYV
NT seq 648 nt   +upstreamnt  +downstreamnt
atggtgtcggccggcttggagattctgggactgtcgctgtgcgtggtgggctctctcctg
gtgatggtggcgtgcgggctgcccatgtggaaggtgaccgcgttcatcgaggccaacatc
gtggtggcgcaaaccatctgggacggcctgtggatgtcgtgcgtggttcagagcaccggg
cagatgcagtgcaaggtgcacgactcggtcctgtccctcagccacgacctccaggcggct
cgggcgctcaccatcatcgcgtcggtgatgggcgtgctggggctgatggtggtgatcgcc
ggagcgcagtgcaccaactgcattcgcaacgactacgtcaaggcgcgggtggtgaacgcc
ggcggcgtgatcttcatcagcagcggcctcttcgtcttggtgcccctgtgctggatggcc
aacaacatcatctcggatttctacaacccgcaggtgcccggctccaagaagcgagagatc
ggcgccgcgctctacatcggctgggcggccacggcgctcctatttatcggcggggccgtg
ctgtgctgctcctgcccgtccggcgggaacgcgggctactcggtcaaatacgcgcccacc
aagagagccacgcctaacggggactacgacaaacggaattatgtgtag

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