Syngnathus scovelli (Gulf pipefish): 125993854
Help
Entry
125993854 CDS
T08785
Symbol
rasgrf2b
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 2 isoform X3
KO
K12326
Ras-specific guanine nucleotide-releasing factor 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125993854 (rasgrf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
PH_11
IQ
DUF2443
Motif
Other DBs
NCBI-GeneID:
125993854
NCBI-ProteinID:
XP_049618767
LinkDB
All DBs
Position
3:19740352..19761030
Genome browser
AA seq
1288 aa
AA seq
DB search
MQKSVRYNEGHALFLSAVARKEGTKRGFLSKKTAENSRWHDKFFALYQNVLFYFDNEQSA
RPAGIYLLEGCTCERAPAPKMSTTGKEALEKQHYFLVVFGHDGQKPLELRTEEEVECDQW
VEAIQQASYSDIIIEREVLMQKYIHLVQIVETEKVAANQLRTQLEDQDTEIERLKAEIIA
LNKTKERMRPYHVNHETEDPDIKKIKKVQSFMRGWLCRRKWKLIVQDYICSPHAESMRKR
NQIVFNMVEAETEYVHQLYILVNCFLRPLRMAASSKKPPISHDDVSSIFLNSETIMFLHE
IFHQGLKARIANWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQVLANCKQNRDFDKLLK
QYESNAACEGRMLETFLTYPMFQIPRYIITLHELLAHTPHEHVERKSLEFAKSKLEELSR
VMHDEVSDTENIRKNLAIERMIVEGCDILLDTSQTFVRQGSLIQLPSVERGKLSKVRLGS
LSLKKEGERQCFLFTKHFLVCTRSSGGKLHLLKQGGVLSLIDCTLIEEPDAGDEDSKAGG
QVFGQLDFKLVVEPADSASFTVVLLAPSRQEKAAWTSDISQCIDNIRCNGLMTSVFEENS
KVTVPHMIKSDVRLHKDDVDICFSKTLNSCKVPQIRYASVERLLERLTDLRFLSIDFLNT
FLHTYRIFTAASVVMDKLADIYKKPFSSIPIRAQYHSFDRLSISSICPDYSLKIKKIAMD
PSKSLELFFATNQNNRGGEHINDKSPRLCRKFSSPPPLSIPSRTSSPVPARKLSLHSPVS
GRVGGLDLSGPLSGLNCNTSPSAAGSPTSAHTPQTPTPTASSPPPPLSSSTSPPQDQVPP
VPSSPEQSPSQCAEGDDVPRIDPFCGKLRRSIRRAVLESASLEKILPESPQSSEAGDMSP
CRSPSTPRHLRFRPPGAQSGENSRCAVSPASAFAIATAAAGHGTPPVFNNSERTCDKEFI
IRRAATNRVLNVLRHWVSKHSQDFEMNGELKMSVICLLEEVLRDPDLLPQERKATANILS
ALSQDEQEDAQLRIEDILQMADCPKAECFESLSAMELAEQITLLDHIVFRSIPYEEFLGQ
GWMKFDKTERTPYIMKTSQHFNDMSNLVASQIMTHTDVGSRASSIEKWVAVADICRCLNN
YNGVLEITSALNRSAIYRLKKTWAKISKQTKALMDKLQKTVSSEGRFKNLRETLKNCNPP
CVPYLGMYLTDLAFIEEGTPNFTEEGLVNFSKMRMISHIIREIRQFQQTPYRIEHQVKVT
QYLLDKTLIMDEDTLYDLSLKIEPRLPA
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaagcgtgcgttacaacgagggccacgcgctcttcttgtcggctgtggcgcgt
aaagagggcaccaaacgcggcttcctgagcaagaagacggctgagaacagccgctggcat
gacaagttcttcgccctttaccagaatgttctcttctacttcgacaacgagcagagcgcg
cgccccgccgggatttacctgttggaaggctgcacctgcgagcgcgcacccgcacccaaa
atgtccaccacggggaaagaagcccttgagaaacagcactacttcctggtggtgttcggc
cacgatggacagaagcctctggagctgcgaacagaggaggaagtggagtgtgaccaatgg
gtggaggccattcagcaggccagttattcagacatcatcatcgagcgagaggtgcttatg
cagaagtacatccacctagtccagatcgtggagacggagaaagtggcggccaatcagctg
cgcacacaactggaggaccaggacaccgagattgagaggctgaaagccgagatcattgct
ctgaacaaaaccaaggagcgtatgaggccttaccacgtcaaccatgaaacagaagatcca
gacatcaaaaagattaagaaggtgcagagcttcatgcgaggctggctctgtcgcaggaag
tggaagctcatcgtgcaggactacatctgctctcctcacgctgagagcatgaggaagcgg
aaccagattgtctttaacatggtggaagcagagacagagtacgtccatcagctctacatc
ctggtcaactgcttcctcagacctctgaggatggccgccagctccaagaagccccccatc
agccacgacgacgtcagcagcatattcctcaacagtgagaccatcatgttcttacatgag
attttccaccaaggcttgaaggccagaatcgccaactggcccactctggtgctagctgac
cttttcgacatcctgctgcccatgctgaacatctatcaggagtttgtgaggaaccatcag
tacagcttgcaggttctggctaactgtaagcagaacagagatttcgacaagctgctcaaa
cagtacgagtccaacgccgcctgcgaggggaggatgctggagacctttctcacttacccc
atgttccagattcctcgctacatcatcaccctgcatgagttgttggctcacacgcctcat
gagcatgtggagcgcaagagcctcgagtttgcaaagtccaaactagaggaactgtccaga
gtcatgcacgacgaggtgagcgacaccgagaatattcgtaagaatctggccatcgagagg
atgatcgtggaaggttgtgacatcttgctggacaccagccaaacgttcgtcaggcagggc
tccctcatccagctgccgtcggtggagcgaggcaagctcagcaaagtgcgactgggctcg
ctctctctgaagaaggaaggcgagaggcagtgcttcctcttcacaaaacacttcctcgtg
tgcactcgcagctccggcggaaaattgcacctcctcaagcaaggcggcgtcttatccctc
atcgactgcactctcatcgaggagccggacgctggcgatgaagactctaaagctggaggt
caggtgttcggtcagctcgacttcaagctggtggtggagccggctgactcggcttcgttc
accgtggttttgctggcgccctcgcgacaggagaaggctgcgtggaccagcgatattagc
cagtgtatcgataacattcgctgcaatggtctgatgaccagcgtctttgaggagaactcc
aaagtcaccgtgcctcacatgatcaaatccgatgtgcgtctccataaagatgatgttgac
atttgcttcagcaagacgctcaactcctgcaaggtcccgcagatccgctacgccagcgtg
gagcgtcttctggagaggctgaccgacctgcgcttcctctccatcgatttcctcaacacc
ttcctgcacacgtacaggatcttcacggcggccagcgtggtcatggacaaactggccgac
atctacaagaagcccttctcttccattcccatcagggcgcagtaccactcatttgaccgt
ctgtccatctcatccatctgtcccgactacagtctgaagatcaagaagatagccatggat
ccgtccaagtccctggagctgttctttgccaccaaccaaaacaacaggggcggcgagcac
ataaatgacaaatctcctcgtctctgccgcaagttctcctctccccctcctctctccatc
ccctcccgcacttcttcgcccgtgcccgcccgaaagctctccctgcactcgcctgtcagc
ggcagggtgggcgggctggacctaagcggtcctctctcaggcctgaattgcaacacgtcg
ccatcggccgccggcagccccacgtcggctcacaccccccagacccctacgccgaccgcc
tcttctccccctcctcctctttcttcctccacctctccaccgcaagaccaagtgcctccc
gttccctcgtctcccgagcagagtccaagccaatgcgccgagggggacgacgttcccagg
attgaccctttttgtggcaaactgagacggagcatacgcagagctgtcttggagtcagcg
tcactagagaaaatccttcccgagtctcctcaaagcagcgaagccggagacatgtcccct
tgtcgctcgccgtccacaccgcgacacctccgcttcaggccaccgggagcccagtccggg
gagaactctcgctgcgcagtttctcctgcctcagcttttgccattgccacagccgcagcg
ggacacggtacgccaccagtgttcaacaactctgaaagaacttgtgacaaagagtttatc
atccggcgggctgcaaccaacagagttctaaacgttctgcgccactgggtctccaaacat
tcacaggactttgaaatgaacggagaactgaagatgtcagtcatctgtctcctggaggaa
gtcctccgagacccggaccttttgcctcaggagaggaaagccactgccaacatactcagt
gccctctctcaagatgagcaggaagacgcccagctgaggatagaagacattttacagatg
gccgactgtcccaaagcggagtgcttcgagtctctctctgctatggagctggccgagcag
atcacgctgctggatcacatcgtcttcaggagcatcccatacgaagagttccttggccaa
ggctggatgaagtttgataagacagagaggaccccatacatcatgaaaacaagtcaacac
ttcaatgatatgagcaatctggtggcgtcgcagatcatgacccatacggacgtgggctcc
agagccagctcaatagagaagtgggtggcggtggccgacatctgccgctgcctcaacaac
tacaacggcgtgctggagatcacgtcagcgctcaaccgcagcgccatctatcgtctgaaa
aagacctgggctaaaatcagcaagcagacaaaagcgctgatggataagctgcaaaaaacg
gtgtcctcggagggaaggtttaaaaatctgagagagactttgaaaaattgcaaccctcca
tgtgtaccctacttgggaatgtacctgacggacttggccttcattgaggagggaacgccc
aactttacagaagagggacttgttaacttttccaaaatgagaatgatttcgcacattatc
agagagatccgacagttccagcagacaccctacaggatagagcatcaggtgaaggtgacc
cagtacctcctggataaaacgctgatcatggatgaagatactctctatgacctctcactg
aagattgagcctcggcttcctgcctga
DBGET
integrated database retrieval system
