Syngnathus scovelli (Gulf pipefish): 125993971
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Entry
125993971 CDS
T08785
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125993971
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Meiosis-specific proteins
Others
125993971
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
125993971
NCBI-ProteinID:
XP_049618997
LinkDB
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Position
3:20963107..20970185
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AA seq
1231 aa
AA seq
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MTAALFCSRFHDPGSVKGKLEKVASCLADSAKLDHLCEETFAKLTTQLDFVTKDNDLLLP
EDMVAANFLPSLKLLPTLKSKVSRLKTLLVADPLTSMSRDSVIEETIFRHCVPYEKSGDE
VHLEDFITEVFTKQSLTPNEPLLLPELLDNHMMTVNYPRSFSSVCHCLNVVAEEPEQLPD
LEALFKDKSASVDICHFPSVESTGKEDWMKDTPPDWVTLPTEMELEVTLTPPTADTSDCH
PCLSLRDLQREELSPVDIISLVPAESQKQLRAVLWKAEKHPNYVLSLLLAEPEVEEAAVD
FEPLNEALKSTSLESLAIETEMGEFFGDMRESPERLTTDVPFREDFNNVLDCFQSIPPEP
EESKTALILVPNYTSSAEFAQKRLACNTNEVKSSSDNRSANKSCVQVSSVPPPSKLDGNF
RSQKMDKRGVVTAAGRHPVQHTDPLTAFMMLRSQQASTPTTAPEEEQERLSVVQLTPQQT
RKADRKPPTNSIIAAAASGHATRGQMTAAAQDAPQSSVIQVQATGSQRQAYRELQSLAGP
CMSSATELGLNLPTWRDFEHLASDQTRYVLKQREVATRRATPAARGDEEQLFHQVLVIHT
LVRAKELLLKCHLSAAVEYLSKAEETCTDTGLIRLLRRLHIILHLGGRNHEPDVKLLELQ
KLVAVRLHDKILIIVSRNCDQRMSTIEQSLKQMTAVCTVHPENDSRTLNGARVVKSVLGS
RCVLVYEQHLGPDFPWDIFSLVVEYDHPGPSPWATVCKERRVKHLTFDTVLPSGDEQESE
ESLEDKVAYVLLVTESLLNRPLLPQMLESTFNIMLLERSHCPSLQMLGGTNYYSIITVDE
STAIVIQEQEELCEERACEAIVMRLTALSLQYNYCWIILHDPDCKGGGFSSEAFSNLVMI
YSSVVLFGMKLEDLDVKVLFASEVAEVAGWVKQICFLSLMSSARNPVDYLERDWLAVTPS
QEELILLHFPCINPLVAQLMLRRAPSLPWLLAASLTQLVEMLPEVPHKVLKLFSNITSLY
EAQPARSDPIHSLPPTPPPAAPSLPPPPEVSIPAPELFPSTNPSFLLAPDDTENSLYSQG
EPTFFTHDPTWPAGSPELSGLSGAGLWKGETSQEVVLTGSMGRSSVAGMMIERGSGEWSQ
QGPSFLDTTFSHLSPPSKGPLRRGGPTGTGSHTGGRSSMMYGSRCWMGQERKRSEDAADL
PRIAPTPLKKSRLSYEKVPGRTDGQTRLKLF
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagctttgttctgctccagatttcatgaccctgggagtgtcaagggcaagctg
gagaaagtagcgagctgtctggctgactcagcaaagcttgaccatctgtgtgaggaaacc
ttcgccaagttgactacccaactggattttgtaactaaagacaacgatctactcctacca
gaagacatggtggctgccaatttcctgcctagtttgaaacttttgccaaccctgaagagc
aaagtgtcccggttgaagaccctcttggtggccgaccctctaacaagcatgagcagagac
tccgtcattgaggaaacaatattcagacactgcgtgccttacgagaagtccggtgatgaa
gtgcacttagaagatttcatcaccgaggtgtttacaaaacagtcactgacaccaaacgag
cctttgctattacccgagcttctggacaatcacatgatgaccgtcaactaccccagaagt
ttttcgagtgtttgtcattgtttgaatgtggttgcagaagagcctgagcaactccccgac
ctggaagcactttttaaagataaatcagcatcagtggacatttgccattttccttcagtg
gaatcaactggcaaagaagactggatgaaggatacccctccagactgggtaacgcttccg
actgagatggagctggaggtgactctgactccaccaactgctgacaccagtgattgccat
ccctgtctgagcttacgtgaccttcagagggaagaattgtctcccgtggacataatatct
ttggtgccagcagaatctcagaaacagttgagggcggtgctttggaaggccgagaagcat
ccaaactatgtactgagcttgctgcttgcagaacctgaagttgaagaagcagctgttgac
tttgagcctctgaacgaagccttgaagtcaacctccctggagagtttggctatagaaacg
gagatgggagaattctttggtgacatgcgggagtccccggagaggctgaccactgacgtt
ccttttcgtgaggacttcaacaatgtgttagactgcttccaaagtattccacctgaaccg
gaagagtcgaaaactgctctcatcttggtcccaaactatacaagttctgctgagtttgct
caaaaaaggcttgcttgtaacacaaacgaagtcaaatcaagctccgacaacagaagcgct
aacaagtcatgtgtccaagtgtcatccgtacctcctccttctaagctggacggcaacttc
agaagccagaaaatggacaagagaggcgttgtcacagcagccggacgtcatccggtgcag
cacaccgacccgctgaccgccttcatgatgctgagatcgcagcaggcgtccactcccact
acagcaccagaggaagaacaagaaaggctctctgtggtgcagcttactcctcagcagaca
cgcaaagcagacaggaagccccctaccaactctatcattgcagctgcagcgtcaggacac
gccactagagggcagatgaccgctgctgctcaggatgcccctcaaagtagcgtgattcaa
gtccaagccactggcagccagcgtcaggcctaccgagaactgcagtctctggccgggcct
tgtatgtcctcagccacagagctgggcctcaatctcccgacctggagggacttcgagcac
ctggcctcggaccaaacgcggtatgtgcttaaacaaagagaagtggcgacgcgcagggca
accccagcggcgagaggagatgaggagcagctgttccaccaggttcttgttatccacaca
ctggttagagctaaggagctgctgttgaagtgtcacctgagcgccgccgtggagtacctg
agcaaggcagaggagacttgtacggacacgggtctgattcggctgctgaggaggctgcac
atcattttacacctcgggggcaggaaccacgaacccgacgtcaaactgctggagctgcag
aagctggtggcggtgcggctgcatgacaaaattcttatcatcgtgtctcgtaactgtgac
caaagaatgtccacaatcgagcaaagcttgaaacaaatgactgctgtatgtacagttcac
cccgagaacgacagcagaacactgaacggtgctagagttgttaaaagtgttctgggcagc
aggtgtgtactggtgtatgagcagcatctgggtccagacttcccgtgggacattttttct
ctggtggtggagtacgaccacccgggcccctctccgtgggcgaccgtctgcaaggaaagg
agagtgaagcacctgaccttcgacacagtcctccccagcggagatgagcaggagagcgag
gagagcctcgaggacaaggtggcgtacgtgttgttggtgactgaatcgctcctcaatcgg
cctctcctgccgcagatgctggagtctacattcaacataatgctactcgagagaagccac
tgtccatccctgcagatgctgggcgggactaattactactccatcatcacggtggacgaa
agcaccgccatcgttattcaggagcaggaggagctgtgtgaggagcgagcctgtgaggcg
attgtgatgaggctcaccgctctctcgttgcagtacaactactgttggatcatactgcac
gacccggactgcaaaggaggagggttctccagcgaagccttcagcaacttggtgatgatc
tactcgtcagtagtgctttttggcatgaagttggaggacctggatgtcaaggtgctgttt
gcgtcagaggtagcggaagtggcagggtgggtcaagcagatctgtttcctcagcctgatg
tccagcgctcgcaatcctgtcgattatcttgagcgagactggctggctgtcacgccttca
caggaggagcttatcctgttgcactttccctgcatcaacccgctggtggctcagctcatg
ctcagaagggcgccctcgttgccatggctactggccgcctctctgacgcagctggtggag
atgttgccagaggtgccacacaaggtcctgaagctgtttagcaacatcacttccctgtat
gaagctcagccagcccggtcagatccaatccattcacttcctcctactcctcctcctgct
gctccatctcttcctccaccacctgaggtgtccattcccgctccagaactatttcctagc
accaatcccagcttcctcttggccccagatgacacagagaacagcttgtactcgcaggga
gaacctactttttttactcacgacccaacatggcctgccggaagcccggagcttagtggc
ttgtcaggagctggtctgtggaagggcgaaaccagccaggaagtggtgctaacaggcagc
atgggccgaagcagcgtggcgggaatgatgatagagaggggaagcggcgagtggtcgcaa
caaggcccgagtttcttggacaccaccttcagccacctcagcccgccttcaaagggccca
ttgaggagaggtggtccgactggtacaggttcacacacgggagggagatcgtcaatgatg
tatgggtcgagatgctggatgggacaagagaggaagagaagtgaagatgcggcagacttg
cctcgaatagcgccgacacctctgaaaaaaagcaggctgagctacgagaaggtgcccgga
cgaacagacggacagaccagactgaagctcttttaa
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