Syngnathus scovelli (Gulf pipefish): 125993978
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Entry
125993978 CDS
T08785
Symbol
hip1rb
Name
(RefSeq) huntingtin interacting protein 1 related b
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125993978 (hip1rb)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
125993978 (hip1rb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
125993978
NCBI-ProteinID:
XP_049619014
LinkDB
All DBs
Position
3:20829199..20842338
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AA seq
1064 aa
AA seq
DB search
MSTLTTRVKARRTEASLGAERDQFDKRQLSSISKAINSTETPVKEKHARRIILGTHREKG
AYTFWSYALGFPLANSSILSWKFCHVLHKVLRDGHRNVLQDCMRHFSSIVELGQLWGNLH
DRYGQLVALYSKLLCTKMKFHNKHSEIPANLEATDEVLERTAGTDINNVFQLTVEMFDYM
DGELKLAETVLRQLNSSIAISTLTSGQCRLSPLIQVIQDCSQLYHFMVKLLFKLHACLPA
DTLQGHRDRFRDQFQSLKTFFNRAREMLFFKRLIQIPRLPDSPPNFLHAASLAKHVKLVV
VIPDEDGDDDDDDDPEPLIDVSDAASSQAAPEPDIFDQAFGPPNGGFDDRDLQIESLKRD
MELLRAELEKVKAEAQRYIMQLKSQINSLEAELEEQRSQKQRALVENEQLRLALEAARRR
ITEHESLQSTFIEAEQRAQATEQRYTKLKEKHTELVASHAELLRRSADTVKMLSATQQTQ
EEVARTRQQLAFEVDRIRQEADMKVEEQKFEMEKLRRELVEKMAEITRIKATLQSSEMSS
AQVNNTMVALQAEKERLMRSVSEKEAELSSVRQSAQLQQSTVQQEKDKNSRELSELQARL
EEKARQEELLKQKLLDEQFALLQGTVTEAENIIQDAVAKLDDPLHIRCTSSPDYLISRAE
VALSSVDKMKNGQAEYVKDMKDAGALLRSLTHFSHAAADTISNGSATAHMAPTDHADKLT
ENCRSCATQSLQYLRELKSKSTLQRADPASIQVIIHKILRLGQELRPKGMDIRQDELGDL
VDKEMAATSAAIEEAVRRIDEVMNQARKDTSGIKLEVNERILNSCTDLMKAIRMLVLAST
ELQKEIVESGRGAASIKEFYARNSRWTEGLISAAKAVGWGATEMVESADKVVLHTGKYEE
LIVCSHEIAASTAQLVAASKVKADRHSKRLTVLQQASRLVNEMAAKVVGSTRTGQDNLED
KDPMDFSGMSLIKLKKEEMESQVKVLELESHLENERLRLGMLRKQHYSLAGVPLDQLQLA
DIDGNGDDEPASLVSMSPRFNKPALMKKPALAQKPSVRLKSPFK
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccctcacgacgcgggtcaaggccaggcgaaccgaggccagcctcggagccgag
agggatcaattcgacaagcggcagctaagcagcatcagcaaagccatcaactccaccgaa
acacccgtgaaggagaagcatgcacggcgtatcatcctaggcactcaccgggagaagggg
gcctataccttttggtcgtacgctctgggcttccccttggccaacagttccatcctcagc
tggaagttctgccacgtgctgcacaaagtcctgcgtgacggccaccgcaatgtgttacaa
gactgcatgagacatttcagttctattgtggaactcggccagctttggggcaacctgcac
gatcgatacggccagctggttgcgctgtactccaagctgctctgcaccaaaatgaagttt
cacaacaagcactctgaaatccccgccaacttggaggccaccgatgaggtgctggagcgc
acggcggggacggacatcaacaacgtctttcagctcaccgtggagatgtttgattacatg
gatggggagttgaagttggctgagacagtgctgaggcaactcaactcgtccatcgccatc
tccacgctcacctcgggccagtgtcgtctgtcgccactcatccaggtcatccaggactgc
agtcaactttatcacttcatggtcaagctcctgttcaagctacacgcgtgtctccccgct
gacactttacaaggacaccgggatcgcttccgggatcagttccagagcctcaagaccttc
ttcaacagagctagagagatgctcttcttcaagaggctcatccaaatcccccgactgcct
gattcaccacccaacttcctgcacgcggcctcgctggccaagcacgtcaagctggtggtg
gtcatccccgacgaggacggcgacgacgatgatgacgatgaccccgagccgctcatcgac
gtcagcgacgccgctagctcgcaagccgcgccggagcccgacatcttcgatcaggccttt
ggaccgcccaacggaggcttcgacgacagggatctccagattgagagcctcaagcgggat
atggagttgttgcgagccgagctggagaaggtgaaagcggaggcccagcgctacatcatg
cagctcaagtcgcagatcaacagcttggaggcggagttggaggagcagcggtctcagaag
caacgcgcgctagtggaaaacgagcagctccgcctggctctggaggcagcgcgtcgccgc
atcaccgagcacgagagcctgcagagcaccttcattgaggcggaacaaagagcccaggct
acagaacaacgctacacgaagctgaaggagaagcacacggagctggtggccagccatgct
gaactacttcgtaggagtgccgacacagtgaagatgctgtctgccacccagcaaactcag
gaggaggtggcgaggaccagacagcagctggcctttgaggtggatcggatacggcaggaa
gcagacatgaaggtggaggagcagaaatttgagatggagaagctgaggagagaactggta
gagaagatggcggaaataacccgcatcaaggccaccctgcagagcagtgagatgtcctca
gctcaagtcaacaacaccatggtcgccctgcaggcggagaaggagcgtctgatgcgctcg
gtgagcgagaaggaggccgagctttcctccgtccgccagagtgcgcagctgcagcaatcc
accgtccagcaagagaaagacaagaacagcagggaacttagcgagctgcaggccagactg
gaggagaaggccagacaggaggagctgctgaagcagaagctcctggacgagcagttcgcg
ttgctgcagggcaccgtcacagaagccgagaacatcattcaagatgccgtggccaagctg
gacgatcccctccacatccgatgcaccagctccccagattatttaatcagtcgagcagag
gtggcactgagctccgtggataaaatgaaaaacggtcaagcggagtacgtgaaagacatg
aaggacgctggagcgctgctgaggtcgctgactcacttctcccacgcagccgccgacacc
atcagcaatggcagcgccaccgcacacatggcgccaactgaccacgcagacaaactgacg
gagaactgcagaagctgcgccactcagagtttgcagtacctgagggagctcaagtccaag
agcacgctgcagagggccgacccagcctctattcaagtcatcatccacaagatcctacgt
ctgggccaggagctgcgaccaaaaggcatggacatccgccaagatgagctgggggatctg
gttgacaaggaaatggccgccacctcggcggccatcgaggaggccgtccgcaggattgat
gaagtgatgaatcaggctcgaaaggacacgtcgggaattaaactggaagtcaatgaaagg
atcctcaacagttgcacagacctcatgaaggctatccgcatgctggtccttgcctccacg
gaattgcagaaggagatcgtggagagcggcaggggcgctgcctccatcaaagagttctac
gccaggaactctcgctggaccgaggggctgatctctgcggccaaggcggtgggctggggg
gccacagagatggtggagtctgctgacaaggtggtgctgcacacaggaaaatatgaagag
ttgattgtctgctcccacgagatcgctgccagcactgcacaactggtcgctgcctccaag
gtgaaagcagatcgtcacagcaagaggttgacggtgctccagcaggcctcgcgcctggtc
aacgaaatggccgccaaagtggtgggctccaccaggacgggacaggacaacctggaggac
aaggatcccatggacttctctgggatgtcgctcatcaagttgaaaaaagaagaaatggag
tcacaggtgaaggtgctggagctggagtctcatctggaaaacgagcgtctgcgtctgggc
atgctgaggaagcagcattactctctggccggcgtgccgctggaccagctccagctggcc
gacattgatggcaacggcgacgacgagcccgcctcgctggtatccatgtcacccaggttc
aacaagccggcgctcatgaagaagcccgcgctggcccagaagcccagtgtccggctcaag
tctcccttcaagtga
DBGET
integrated database retrieval system
