Syngnathus scovelli (Gulf pipefish): 125993981
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Entry
125993981 CDS
T08785
Symbol
zgc:152968
Name
(RefSeq) putative exonuclease GOR isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125993981 (zgc:152968)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sscv03009
]
125993981 (zgc:152968)
Ribosome biogenesis [BR:
sscv03009
]
Eukaryotic type
Pre-60S particles
RNases
125993981 (zgc:152968)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
NTF2_7
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
125993981
NCBI-ProteinID:
XP_049619018
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All DBs
Position
3:complement(20979498..20986612)
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AA seq
1030 aa
AA seq
DB search
MFPASELFARVPCPFPKRSCKRPYCWYKHTEDGRHLFGHSFPPLWSLQPDPTGAQNDIKS
TLLATQVADHTKNQPFQELECINKKIEMAKYEVEQERRRLSCYRAAEFITLTEAKGKNSN
SCKYVHRLNIKIPSTQSTKYVLDKSKPRTDLEYDPMSNFTAEFGSYKSINKSLKGMSTHQ
GDVKKPVSHQVAPYHSPSPGIQDYNDADGFLILDRPSLPGRSLSQTCCDPDTHLKPVQEK
SSFKDREASATNVIDLTECVEKRPDPKASISQNTEDETKRDDISDKSNQRLCVEVSKYLS
AVRETTECQPPKKSGQESSCAQIDSHQVSAEASSLKEPLSEKAANEDVIVIDSSSDEDEE
AMAGELSDSDPVEECYRIFMEANNQQHAVQQQPEVPMETNESAKPNNPDLRAFQPQELPP
KKRIAHEFRDAEVAAAKRRPQPKVLVPLQEPVKPSPASQLGAAVPKTQHVQQKAAILTAD
VNGAQAFLSSAAQRKQERWLLATSSSTPPVATASMSPAPQQKACVNNIPPGSAVINVGVN
LHLILPQGTLPLNATSNTVTSVLTPITQVHLGSDKNVSLSAPMHRPTAPLLIPAIPWRRC
HSSAAVALPTPASETTSQVSVKPGATPKRKAKQQPEAAKDKVPHGVRQCYVTKFTEVFLD
TSANVDEAFKKALAEEKTVYSRSVNKLKYLSIAVNALKRLKKQNSGSSRDEIINGKSSKG
NIPLNQKQLRGKDDDALHEILRDYILSEEQLIESNYPIQHPEKPGYAILLANQRKDNNLA
LKRICCRCGATYSVNKEGKHTRMEECNYHYGKGVEKKVPGGVETRYSCCQGVMGAPGCQI
FKLHVHDSLAMDGFMATSPRWPVNGCFPGVYALDCEMCYTIHGLELSRVTVVNSNLQVVY
DTFVKPRNEVIDYNTRFSGISEEDMKDNQVSLAEVQKTLLSFISADTILIGHGLETDLCA
LKLLHNTVVDTAVVFPHRLGPPHRLSLSSLTAEHLTRIIQESVCGHDTAEDAFACMELML
LKGKDGKMKK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgttcccggcttctgagctcttcgcccgggtaccatgccctttcccgaagcgctcctgc
aaacgcccctactgttggtacaaacataccgaggacgggcgacatttgtttggacactcc
ttcccgccattgtggtcgttacaaccggacccaacaggtgcccaaaatgacattaagtcc
accttattagcgacgcaagttgcagaccacaccaaaaatcagcccttccaagagctggag
tgcatcaacaagaagatcgaaatggctaagtatgaagtagagcaggagcgaaggaggctg
tcatgctaccgcgcggcagaattcatcaccctcactgaggcaaaaggcaaaaattcaaat
agctgtaaatatgttcatcgtctgaatatcaaaataccctccacccaatccacaaagtac
gtgcttgacaagtccaagccgaggaccgacttggaatacgatcctatgtctaacttcaca
gctgaattcgggtcatacaagtcaattaataagtcgttgaaaggaatgagcacacatcag
ggtgatgtaaaaaagccagtcagccatcaggtggcgccgtaccactctccgtcccctggg
atacaagattacaacgacgctgatggcttcctgatactggacagaccatccttgcctggc
aggagtttatctcaaacttgctgtgatcctgatactcacttaaaaccagtccaggagaaa
tcctccttcaaggaccgagaagcttctgctacaaatgtgattgacctgaccgagtgtgtg
gaaaagcgtcccgatcccaaagctagtatttctcaaaacacagaagatgaaaccaaacga
gatgacatttcggacaagagcaaccagcggttgtgtgtggaggtttcgaagtatttgtca
gcggtgcgggaaaccactgagtgccagccacccaagaagagtggtcaggaatcaagctgt
gctcaaattgacagccaccaggtgtcggcagaggcctcatctctcaaggagcctttgtca
gaaaaagcagccaatgaagatgtcatcgtcatcgattccagctctgatgaggatgaagaa
gcgatggctggggagctgtcggacagcgaccctgtggaggagtgctaccgcatcttcatg
gaggcgaacaaccagcaacatgctgtccagcagcagccggaggtccctatggaaacaaac
gagtcggcgaaacccaacaatcctgaccttcgggccttccaaccccaagaactgccacca
aagaagaggatcgcgcatgagttcagagacgcggaggttgcagcggcaaaaaggaggcca
cagcctaaggttctggttccactacaagaaccagtgaaaccatccccggcctctcagctc
ggcgccgccgtgcccaagactcaacatgtccagcagaaggcggccattttgacagctgac
gtgaacggagcccaagcgtttctctcgtccgccgctcaaaggaagcaagagagatggctc
ctagccacttcttcttcaacgcctccagtagcgaccgctagcatgtcgcccgctcctcaa
cagaaagcatgcgtcaacaacatacctccaggctccgccgtaatcaacgtgggcgtcaac
ttgcatctgatcctccctcagggcaccctgcctctcaacgccacctccaacacggtcacc
tccgtcctgacccccatcactcaagtgcaccttggctcagacaaaaacgtgagcctttcg
gcgccgatgcatcggcccaccgcgccgctgctcattcccgccattccgtggagacgctgc
cattcttccgccgcggtggctcttccaacgcccgccagtgaaacgaccagccaagtctct
gttaagccaggagcaacccccaaacgaaaagccaagcagcagcctgaggcggccaaagac
aaagtgccccatggcgtccgacagtgttacgtcacaaagttcactgaggtgttcctcgac
acctccgccaatgtcgacgaggcctttaaaaaggcccttgctgaggagaaaacggtgtac
agtcgcagcgtcaacaaactcaaatatctcagcatcgctgtgaatgcactgaaaaggttg
aaaaagcagaattcaggcagttccagagatgaaataatcaacggcaaaagctcaaaagga
aatattccactaaaccaaaagcagctcagaggaaaggatgatgacgctttgcatgagata
ttgcgggattacattctgagcgaggagcagctgattgagagtaactatcctattcagcac
cccgagaaacccggctacgctatccttttggcaaaccagaggaaggacaacaacctagcc
ttgaagaggatttgttgccggtgcggagctacatactctgtgaacaaagagggcaagcac
acccggatggaagagtgcaactatcactatgggaaaggagtggagaagaaagtgccaggt
ggggtggagactcgctatagctgctgccagggagttatgggagcacccggttgccagatt
tttaagttgcatgtgcacgattccctcgccatggatggatttatggcaacctccccccgg
tggcctgtaaatggctgcttcccgggtgtctatgcgctggactgcgaaatgtgttacacc
attcacggcctggagctgtcacgagtgactgtggtgaactcaaacctccaagtggtctac
gacacgtttgtcaagccacgcaatgaggtcatcgactacaacaccaggttttctggcatc
agcgaggaggacatgaaggacaaccaagtgagtctggctgaggtgcagaagacattgttg
agcttcatcagtgccgacaccattctgattgggcacggcctggaaactgatctctgtgcc
ctgaagttgcttcacaacacggtggtggacaccgcagtggtcttcccccatcgcctgggt
cctccacacaggttgagcctcagcagcctcacagcagaacacctgaccaggattattcaa
gagagcgtgtgcggccacgacacagcagaagatgccttcgcctgcatggagctcatgttg
ctgaaggggaaagatggcaaaatgaaaaaatga
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