Syngnathus scovelli (Gulf pipefish): 125994017
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Entry
125994017 CDS
T08785
Name
(RefSeq) long-chain-fatty-acid--CoA ligase ACSBG2-like
KO
K15013
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00061
Fatty acid biosynthesis
sscv00071
Fatty acid degradation
sscv01100
Metabolic pathways
sscv01212
Fatty acid metabolism
sscv03320
PPAR signaling pathway
sscv04920
Adipocytokine signaling pathway
Module
sscv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
125994017
00071 Fatty acid degradation
125994017
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
125994017
03320 PPAR signaling pathway
125994017
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sscv01004
]
125994017
Enzymes [BR:
sscv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
125994017
Lipid biosynthesis proteins [BR:
sscv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125994017
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
125994017
NCBI-ProteinID:
XP_049619108
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Position
3:complement(21061101..21068133)
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AA seq
717 aa
AA seq
DB search
MAEAVMSNGLTGLDGHHLDRIAEPSALTVDSTKKDTHRNGASAGATHQAQAEPTAIPLKP
QVHATASLAPAEQLWTTSKQGAVRLRMETSGPAADIPVTVHQMFLGTVEAFGDHPALASK
KDGQWETLTWRQYYQQCRTAAKSFLKLGLERYHGVGILGFNSPEWFVANVGCILAGGLAT
GIYTTNAPAACREVASTIQANIIVVENQQQLDKILQVKDDLPHLKAIVQYKGELKQRIPS
LYTWAEFMRLGEDVPEKDLNDSINSLRANECCTLIFTSGSTGPPKGVMLSHDNVTWTVQR
AGDLVGLRYAEESVVSYLPLSHVAAQLNDMYITMRFAATTYFAEPDALKGSLGTTLKEVK
PTAFLGVPRVWEKIQEKMQEAGAKASPFKKSVADWAKAIGLMYNYSAMHGEKRVPWGFTL
ANQLVFKKVRVALGLERCRTLLTGSAPISKETLEYFMSLNMPLLELYGMSESSGPHTVST
NDDFHINSCGKVMPGCKVKLENQDSEGNGEVCFWGRNVFMGYLNKDDKTKEALDQDGWLH
SGDIGRFQRNFLFITGRIKEIIITAGGENVAPVPIENMVKAEVAIISNAMLIGDKKKFLT
MLITLKCVVDQEGNPTEQLSQEATDFCRNLGVGATRVSEIIDNKEPAVYKSIQEGMERYN
ANAVSRAQKVQKFVILPRDFSIAGGELGPTMKVRRPIVVQMYQDKIDEMYTEQTQTK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcggtgatgtcaaacgggctcacgggcttggatggacaccatctggacagg
atcgcagagccctccgcgctcaccgtcgattccaccaagaaggacacgcacaggaatgga
gcctcagccggagcaacgcaccaggcacaagcagagcccaccgccatcccactgaagccc
caggtgcacgccaccgctagcctggccccggccgagcagctgtggaccaccagcaagcag
ggggcagtccgcttgcggatggagacgtcaggaccggccgccgacatccctgtcacagtg
caccagatgttcctggggacggtggaggccttcggggaccacccggccttggcatccaag
aaggacggacagtgggagacgctcacgtggaggcagtactaccagcagtgcaggacggcg
gcaaagagcttcttgaagctcggcctggagcgctaccacggggtgggcatcctgggcttc
aactcccccgagtggttcgtcgccaatgtgggctgcatcttggccgggggtttggcgaca
ggcatttacaccaccaacgcacccgcggcctgtcgggaagtggctagcaccatacaggcg
aacattattgtggtggagaaccagcaacagctggataaaatcctgcaggtgaaagatgat
ctgccgcatctcaaagccattgtccagtacaaaggagaactaaagcagaggatcccctcc
ctttacacatgggcggaattcatgaggctgggcgaggatgtgcctgaaaaagacctcaac
gattccatcaacagcctccgtgccaacgaatgctgcactctcatcttcacgtcaggatcc
accggacccccaaaaggtgtcatgctgagccacgacaacgtgacctggacggtccaaaga
gcaggagacttggtgggcctgcgctacgccgaggagtcagtggtcagctacttgcctctc
agccacgtggcggctcagctcaatgacatgtacatcaccatgaggttcgcagcaaccaca
tatttcgccgagcccgatgccctcaagggatccttggggaccacgttgaaggaggtcaag
cccaccgccttcctaggtgtccctcgcgtttgggagaagatacaggagaaaatgcaagag
gccggcgctaaggcgagcccgttcaagaagagcgtggccgactgggccaaggccatcggg
ctcatgtacaactacagcgccatgcacggggaaaagcgcgtgccgtggggcttcaccttg
gctaaccagctggtgttcaagaaggtccgagtggcgctgggcctggagcgctgccggacc
ttgttaactgggtcggcccccatctccaaggagaccctggagtacttcatgagcctgaac
atgcccctcttggaactgtacggcatgagcgagagctccggcccgcacactgtctccact
aacgatgactttcacatcaacagctgcgggaaggtgatgccaggctgcaaggtgaagctg
gagaaccaggactcggaaggcaacggggaggtctgcttctgggggcgcaacgtcttcatg
ggctacctcaacaaggacgacaagaccaaagaggccctagaccaggacgggtggctgcac
tccggagacattggaaggttccagcgaaacttccttttcatcactggaaggattaaagag
atcattattaccgctggcggcgagaatgtggccccagtccccatcgagaatatggtgaag
gcggaggtggccatcatcagcaacgcaatgctaatcggagacaagaagaagttcctcacc
atgctcatcacgctcaaatgcgtcgtggaccaagagggcaaccccacagagcagctgagc
caagaggccaccgacttctgccgcaatcttggcgtcggtgccaccagggtgtcggagatc
attgataacaaggagcccgctgtctacaagtccattcaggagggcatggagcgatacaac
gccaatgccgtctccagagcgcagaaggtacagaagtttgtcatcctgccaagagacttc
tccattgcgggaggagagcttgggcccaccatgaaagtccggaggccaatcgtcgtccaa
atgtaccaagacaaaatcgatgagatgtacaccgagcagacgcaaacaaaataa
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