Syngnathus scovelli (Gulf pipefish): 125994033
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Entry
125994033 CDS
T08785
Symbol
plat
Name
(RefSeq) tissue-type plasminogen activator isoform X1
KO
K01343
tissue plasminogen activator [EC:
3.4.21.68
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
125994033 (plat)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125994033 (plat)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sscv00536
]
125994033 (plat)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.68 t-plasminogen activator
125994033 (plat)
Peptidases and inhibitors [BR:
sscv01002
]
Serine peptidases
Family S1: chymotrypsin family
125994033 (plat)
Glycosaminoglycan binding proteins [BR:
sscv00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
125994033 (plat)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
DUF1986
hEGF
EGF
fn1
Trypsin_2
JAG1-like_EGF2
EGF_C8A_B_C6
cEGF
Motif
Other DBs
NCBI-GeneID:
125994033
NCBI-ProteinID:
XP_049619137
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Position
3:complement(22495386..22504508)
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AA seq
605 aa
AA seq
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MSRILLLVLTALFCYLADSAELLRSKRGTRFYRGEPERKTSRRALFIVHIQKPSPSFDTS
PRCVDSTTSAVHNFGDTWLRWRGQRVEFCRCALRGREFCHVVPVINCYTSHCYNGGTCKE
AVYSSDYICQCPAGFSGTQCEINTKEKCVVGSGEAYRGTWSITKSGAECINWNATALRGK
KFTARKVDASSLGLGNHNFCRNPDHDGTPWCYTYKGTQIIWEFCSLPKCSEDKFDECMRG
IGLTYRGTESVTKSGARCLPWDSPAIAHKFNNAWQSDALQVGLGSHSYCRNPDGDEGPWC
HVYKNTRLTWELCDVPKCTDHLSTITPLGPRAPVTTNNQGICGQRSDNTLSKPTFRMFGG
RQSDISEQPWQAVINVYQARLRKHFHRCGGILIDSCWILSAAHCFEPTDKPSKLEVILGR
TFRKENSSSEQIFKVEKYWIHEKFDNESFDNDIALLKLQTDIGVCAVNTPEVLPACLPEP
GLVLPDWTECEISGYGKDSEFSAHYSERVKRGFVRLWPKERCVPGVLSGRTVTANMLCAG
DTRGLDDACKGDSGGPLVCRSNDKMTLMGVISWGDGCGQRDKPGVYTRVTRYIDWIHGKM
TANPI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaatattattactggtccttaccgctctcttctgctatctagcggacagtgcg
gagctcctccgctccaagagaggaactcgtttttaccgaggtgagcctgaacggaagaca
tccaggcgggcacttttcattgttcatatccagaagccttcaccttcctttgacacctcc
ccacgttgtgtggatagtacgacatcagccgtgcataattttggggacacttggctgcga
tggaggggacagcgtgtggagttttgccgttgtgcgttaagaggacgagaattttgtcac
gttgtgcccgtcatcaactgctacacgtctcattgctacaacggggggacatgcaaggag
gccgtgtattcttcggactatatttgccagtgccccgcaggtttcagtggaacccagtgt
gagatcaacaccaaagagaagtgcgtcgtggggagcggggaagcctatcgcggaacgtgg
agtatcaccaagtcgggagcagagtgcatcaactggaacgccacggcgctcaggggaaag
aagttcaccgccaggaaagtggacgccagcagcttgggattgggcaaccacaacttctgc
aggaaccctgaccatgacggcactccttggtgctacacctacaaaggcactcaaatcatc
tgggagttttgttccttgcccaagtgttcagaagataaattcgacgaatgcatgcgaggg
atcggtctgacgtacaggggcaccgagtcggtcactaaaagcggcgcccgctgtctccct
tgggactctccggccatcgcgcacaagttcaacaacgcttggcagtccgacgccctccaa
gtgggcctgggcagccacagctactgcaggaatcctgatggtgatgaaggcccgtggtgt
catgtatacaaaaacacgcggctgacttgggagctctgcgatgtgcctaaatgcacggat
catctatccaccatcacaccattgggccctcgagcccccgtaaccaccaacaaccaaggg
atatgcggccagcgttcggataacaccctgagcaagcctaccttccgcatgttcggaggt
cgccagagcgatatttctgaacagccctggcaggccgtcattaacgtttaccaggctcgt
ctgcggaaacatttccaccgctgcggggggattctcatcgactcctgttggatcctgtct
gctgctcactgcttcgagcccacggataaaccctcaaagttggaggtcattctgggcagg
acgttccgcaaagagaattccagcagtgagcagattttcaaagtggaaaaatactggatc
cacgagaaatttgacaacgagtcgttcgacaatgacatagctctgctgaagctccagaca
gacattggcgtgtgcgctgtcaacaccccggaggttctccccgcgtgtcttcctgaacct
ggtctggtattacctgactggaccgagtgcgagatctcaggctacgggaaagactccgag
ttttctgcccattactctgagcgtgtcaagagaggttttgttcgcctgtggcccaaagag
cgttgtgtccctggtgtgctgtctggacgtacggttaccgctaacatgctgtgtgcgggc
gacacaagaggtctggatgatgcctgcaagggagactctggcggtcctctcgtctgccgc
tccaacgacaaaatgaccctgatgggcgtcatcagctggggtgacgggtgcggccagagg
gacaagcctggcgtctacacccgcgtcacccgttacatcgactggattcacggcaaaatg
acggccaaccccatctga
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