Syngnathus scovelli (Gulf pipefish): 125994056
Help
Entry
125994056 CDS
T08785
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125994056 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125994056 (ppil2)
03110 Chaperones and folding catalysts [BR:
sscv03110
]
125994056 (ppil2)
04121 Ubiquitin system [BR:
sscv04121
]
125994056 (ppil2)
Enzymes [BR:
sscv01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
125994056 (ppil2)
Spliceosome [BR:
sscv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125994056 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
125994056 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
125994056 (ppil2)
Chaperones and folding catalysts [BR:
sscv03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
125994056 (ppil2)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
U-box type E3
125994056 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
125994056
NCBI-ProteinID:
XP_049619205
LinkDB
All DBs
Position
3:22268571..22275345
Genome browser
AA seq
528 aa
AA seq
DB search
MGKRQHQKDKMYITCTEYTNFYGGKRAEIPQANFRRLPFDHCSLSLQPFSYPMCTADGVV
FDLLSIIPWIKRYGTNPISGEKLEAKSLVKLNFSKNNEGKYHCPVLYSVFTNNSHIVANK
VTGNVYSNEAVEQLNIKTKNFKDLLTDEEFTRKDIITLQDPSNLDKFNVANFFHVKNDLK
VPDPDEEKAKRDPSYHLKTTNLETRETLAELYKDYKGDQLLAATMKEPESKKTDKLNMAH
YSTGRVAASFTSTAMTPATTNQADAIADDTVRYSYIKKKGYVRLNTNKGDLNVELHCDKI
PKACENFIGLCKRGYYDGTVFHRSIRNFMIQGGDPTGTGTGGESFWGKAFKDEFRPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCSYLDRKHTVFGRVVGGFETLTAMESVESDPKTD
KPKSEIKIISATVFVDPYEEADAEIAVEREKEQQQQQEEEQQLASATLRITNETLAPKAF
KQGVGKYINPTAAVKRPTTEEESGPSTSSVAAAKKPKGKSTFGDFSSW
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcggcagcatcaaaaggacaaaatgtatattacgtgtactgagtacactaac
ttctatggaggcaagcgggcggaaatcccgcaggccaatttcagacgccttccgttcgac
cactgcagcttgtcccttcagccgttttcttatcccatgtgcactgcggacggtgtcgtc
tttgacctgctgagcattattccttggatcaagaggtacgggacgaatcccatatctgga
gagaaactggaggccaagtcactggtcaagctcaacttttccaagaacaacgaaggcaaa
tatcactgtcctgttctgtactcggtcttcacaaataattctcacatcgtcgccaacaag
gtcaccggcaatgtctactccaatgaggctgtggagcagctcaacattaagacaaaaaat
ttcaaagatctgttgactgatgaagaatttaccagaaaagacatcatcacgcttcaggat
ccaagcaacctggacaagttcaatgtggccaactttttccatgtgaaaaatgacctcaaa
gtgccggatcccgatgaggagaaggccaagcgcgacccctcgtaccacctaaagaccacc
aacctggagacccgggagaccctggccgagctgtataaagactacaagggggaccagctg
ctggccgccaccatgaaggaacctgagtccaagaagacggacaagctcaacatggctcac
tactcgacgggtcgagtggccgcctccttcacatcaacggccatgacgccggccaccacc
aaccaagcagacgccatcgcagacgacacggtgcgctacagctacatcaagaagaaaggt
tacgtgcgcctgaacaccaataaaggagacctcaacgtggagttgcactgtgacaagatt
cccaaagcgtgtgagaacttcattgggctgtgcaagagaggctactacgacggcactgtc
ttccaccggtccattcgcaattttatgattcaaggaggcgacccgaccggcacgggcaca
ggtggagaatccttctgggggaaagctttcaaggacgagttccgacccaacttgtcccac
acgggccggggtgttcttagcatggctaactctggtccaaacaccaacaagtcccagttc
ttcatcacattccgctcctgctcctacctggacaggaaacacacagtgtttggaagggtt
gtcggtgggtttgaaacgttgacagccatggagagtgtggagagtgaccccaaaacagac
aaaccaaagtctgagatcaagatcataagcgcgaccgtgtttgtggacccgtacgaagag
gccgacgctgagattgccgtcgagcgggagaaggagcaacagcagcagcaggaggaagag
cagcagctggccagcgccaccctgaggataaccaatgaaacactggcgcccaaggccttc
aagcaaggcgtgggcaaatacattaaccccaccgcagcagtgaaacgtccgactacagaa
gaagaaagcggtccttcgacaagtagcgtcgctgctgccaagaaaccaaaaggaaagagc
acttttggggacttcagctcctggtag
DBGET
integrated database retrieval system
