Syngnathus scovelli (Gulf pipefish): 125994117
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Entry
125994117 CDS
T08785
Symbol
xbp1
Name
(RefSeq) LOW QUALITY PROTEIN: X-box-binding protein 1
KO
K09027
X box-binding protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125994117 (xbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125994117 (xbp1)
04131 Membrane trafficking [BR:
sscv04131
]
125994117 (xbp1)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, Jun
125994117 (xbp1)
Membrane trafficking [BR:
sscv04131
]
Autophagy
ER-phagy
ER stress-related proteins
125994117 (xbp1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
SR-25
NRBF2
CASP_C
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
125994117
NCBI-ProteinID:
XP_049619289
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All DBs
Position
3:20724163..20726670
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AA seq
385 aa
AA seq
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MVVVTSTSGGAHKLLLISGKQRGGTSTASFGRPISVVLPSSSSQASSDSESSSSAVPPVR
KRQRLTHLSPEEKALRRKLKNRVAAQTARDRKKAKMGELEQQVLELELENKKLHIENRLL
REKNNGLLTENDGLKHRLNLDAFDSKEKVLVSNGNESSLGIGFSESSTQATCASAAGADP
AVPKPENVPMDTDGPDAADNESDLFLGILDIFDPEHFIQSCEQPSLLLVSGGDPLPTAAP
APLGTPSIKLETLNGLIQLDHIYTKPAEVATEDAKESDNNLTASFSVAEVVVSEDDVCIK
DEPEEAVIPTQMDDFLCHADAAAAAASSPALGGLDKEACLADAYSDSGYECSLSPLSNMS
SSPLCSGSPWDDIFATELFPQLISV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggtaacatcaacgagcggaggcgcccacaaactgcttctcatctccgggaag
cagaggggcggcacgtcgacggcgagtttcggccgacccatctcggtcgtcctgccgtcc
tcctcgagccaagcgtcgtcggactccgagtcaagcagctcggcggtgccgccggtgcgc
aaaagacagcggctcacacacttgagtcccgaggagaaggcactgagaaggaaactgaaa
aacagagttgcggctcagactgccagggacaggaaaaaagccaaaatgggcgaactggag
cagcaggtcctggagttggagcttgagaacaaaaagcttcacattgaaaaccggctcctc
cgggaaaaaaacaacggcctgcttactgaaaatgatgggctgaagcacagacttaatttg
gacgcctttgactcaaaggagaaggtgttggtgtccaatgggaatgagtcaagtttggga
atcgggttttctgagagcagcactcaggctacgtgtgcctctgcagcaggtgcagaccca
gcagttcctaaacctgaaaacgtcccaatggatacagatggtcctgatgctgcagacaat
gagtctgatctgttcctgggcattctggacatctttgacccggagcatttcattcagtcc
tgcgagcagccgtcattgctcctggtcagcggaggcgatccactacccaccgccgcacct
gcgcctctggggaccccatcaatcaagctggagacccttaatggactgatacaattggat
cacatttacaccaagccagcagaggtggccacggaagatgccaaggaaagcgacaacaac
ctgactgcttccttttccgtcgccgaggtggtggtgtcggaggacgacgtctgcatcaaa
gacgagccggaggaagcggtcatccctacacaaatggacgacttcctctgccatgctgat
gctgcagccgccgccgcctcctcacccgccctcggcggcctggataaggaagcctgcctg
gcagacgcctacagcgactctggatacgagtgctccctctcccctttgagcaacatgtcg
tcgtccccgctatgctccggcagcccctgggacgacatatttgccactgaactcttcccc
cagctcattagcgtgtga
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