Syngnathus scovelli (Gulf pipefish): 125994254
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Entry
125994254 CDS
T08785
Symbol
tacr1a
Name
(RefSeq) tachykinin receptor 1a
KO
K04222
tachykinin receptor 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04020
Calcium signaling pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125994254 (tacr1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125994254 (tacr1a)
04082 Neuroactive ligand signaling
125994254 (tacr1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sscv04030
]
125994254 (tacr1a)
G protein-coupled receptors [BR:
sscv04030
]
Rhodopsin family
Peptide
Tachykinin
125994254 (tacr1a)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
125994254
NCBI-ProteinID:
XP_049619424
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Position
3:11219789..11264204
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AA seq
443 aa
AA seq
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MDPIFDGADEVNCTTSNNGTNNGTVYWNQFVQPAWRIFLWAIAYCSIVIVSVLGNVTVIW
IIMAHKRMRTVTNYFLLNLAFAEASMSAFNTVINFVYAVHNEWYFGLIYCRFHNFFPIAA
VFASICSMTAIALDRYMAIIHPLQQRMSSTETKVVVGVIWALALLLAFPQYYYSNIEQYP
GRVVCYIDWPEYTICDFKKMYYVCVAILIYFLPLLVMGCAYLVVGLTLWASEIPGDSSDR
YKEQLTAKRKVVKMMIVVVCTFAICWLPYHVYFLLHQFFPDMFEETFIQQVYLAVMWLAM
SSTMYNPIIYCCLNDRFRAGFKQAFRCCPCVPQSSYEGLELKSTRYFQTQTSICKASRIE
TTVSTVVQVGDEMERSKAKVTLGHGPDETVIGAGPQSCSLDLTSNGSSQSVSKATASNFF
SYSNLQEQMLNTSNFLSDSQERM
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggacccaatttttgatggcgcggacgaagtcaactgtaccacaagtaacaacggcacc
aacaacgggaccgtgtactggaaccaatttgtgcagccagcctggagaatattcctgtgg
gccattgcttactgcagtatagtcatcgtgtcggttcttgggaatgtgacggtgatttgg
atcatcatggcgcacaaacgcatgagaacggtcaccaactatttcctgctcaatttggcg
tttgccgaagcttccatgtccgccttcaacacggtcatcaacttcgtctacgccgtgcac
aacgagtggtacttcggactgatctactgccgctttcacaacttctttcctatcgcggct
gtgtttgccagcatctgttccatgaccgccatcgccctggacaggtacatggccatcatc
cacccattgcagcagcgcatgtcatccacagagaccaaggtcgtagtaggagtgatctgg
gccctggctctgctcttggcctttccgcagtactactactccaacatagagcagtacccc
ggccgtgtggtgtgctacattgactggcctgaatacacaatatgtgacttcaaaaaaatg
tattatgtgtgtgtggccatcctgatctacttccttcctttgttggtgatgggctgtgct
tatctagtagtgggactgaccctctgggccagtgaaatcccaggagactcttctgatcgc
tacaaggagcagctgactgctaaacgcaaggtggtgaagatgatgattgtagtggtgtgt
acgtttgctatctgctggctgccctatcatgtctacttcctgctgcaccaattttttccc
gatatgtttgaggaaacgtttatccagcaggtctatttggccgtcatgtggctggccatg
agttccaccatgtacaacccgatcatctactgctgcctaaacgacaggttccgtgcaggt
ttcaaacaagctttccgctgctgcccctgtgtccctcaaagctcctacgaaggcctggaa
ctgaagtcgacacgctactttcaaactcagacgagcatttgcaaggcaagccgaatagag
accactgtgtctactgtagtccaggtgggcgatgaaatggagcgctctaaggccaaagtc
acgcttggtcatgggcctgatgaaaccgtcatcggggcaggaccacaaagctgttcgctg
gaccttacatcaaatggttcttcccagagcgtctccaaagccacagcatctaatttcttc
tcatatagcaacctccaagagcagatgttaaacacaagcaactttttgtccgatagccag
gaaagaatgtga
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