Syngnathus scovelli (Gulf pipefish): 125994312
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Entry
125994312 CDS
T08785
Name
(RefSeq) transducin-like enhancer protein 4 isoform X1
KO
K04497
groucho
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04310
Wnt signaling pathway
sscv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125994312
04330 Notch signaling pathway
125994312
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125994312
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
125994312
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TLE_N
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
CFAP251_N
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
DSE1_N
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_SPT8
ASA1
Beta-prop_EIPR1
Beta-prop_ACSF4
Beta-prop_WDR41
Beta-prop_NUP159_NUP214
HALZ
WD40_RFWD3
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
125994312
NCBI-ProteinID:
XP_049619533
LinkDB
All DBs
Position
3:complement(24930190..24945253)
Genome browser
AA seq
779 aa
AA seq
DB search
MTVEPQLSQFALSSSFMVRSLWFEVPHQPGQPFKFTVSESCDRIKEEFQFLQAQYHSLKM
ECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVVPFLSQEHQQQVV
QAVERAKQVTMAELNAIIGQQQLQAQHLSHGHAIPVPLTPHPAGLHPPLPHGAGTAGLLA
LTSALGHQLPLKDERKHQDGAEEHPRAERDSVKSSSVSPSASFRTGEKHRGSGDYSADSK
KQKTDDKELSSTRYESDGEKSDDNLVVDVSNEDPASPRGSPAHSPRENGLDKSRPLKKDA
PLSPSSVASSSSTPSSKSKEIHLKNEKSTTPVSKSSTPTSRCDAPTPSGTTASLRAAQPS
KPAGVEALPPGLRTPLAVPCSYPGPFGMVPHLGMNGELSGAGAPYTGLHSMSTVAAAAVA
AYGRTQVVGFDPHHHIRVPGLPPNLSGIPGGKPAYSFHVSADGQMQPVPFPPDALIGPAI
PRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKTSVSQLDCLNRDN
YIRSCRLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS
CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQL
QQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVSKPDKYQLHLHESCVLSLRFAHCGK
WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgacagtggaacctcagttgtctcagtttgccctctcttcttctttcatggttcgttcg
ctttggtttgaggtcccacaccagccggggcagccgttcaagttcaccgtgtccgaatcc
tgcgaccggatcaaggaggagttccagttcctccaggcccagtatcacagcctgaaaatg
gagtgtgagaaactggcaagtgagaaaacggagatgcagagacactatgtcatgtactac
gaaatgtcatatggactcaacatcgagatgcacaaacaggcggagattgtcaaacggctg
aatgcaatctgcgcccaagtcgtgcccttcctttctcaagagcatcagcagcaggtggtt
caagcggtggagcgggccaagcaggtcaccatggcggaactcaacgccatcattggacag
cagcaactccaggcacagcacctctcgcacggccacgccatccccgtcccgctcacgccg
cacccggcgggccttcaccccccgctgccccacggcgccggtaccgccggactgttggcg
ctcacctcggcactcggccatcagctgcccctcaaagacgagaggaaacaccaggatggc
gccgaagaacacccgagagcagagagagattctgtgaagagctcatctgtgtctccgtcc
gccagttttcggactggagagaagcaccgaggttccggcgattactccgccgacagcaag
aagcagaagacggacgataaagagttgagctccacgcgctatgagagcgacggtgagaag
agcgacgacaacttggtggtggacgtgtccaatgaggatccggcttctcccagaggaagc
cccgcccactctcctcgggagaacggattggacaagagtcgcccgctgaagaaagatgcc
cccctgagtccctcttctgtggcctcctctagcagcaccccttcgtccaaatccaaagag
attcatttgaagaatgaaaaatccacaacacccgtttccaagtccagcacacccacatcc
cgctgcgacgcgcccactcccagcggcaccaccgccagcctgagggcagctcagcccagt
aagccggcaggagtcgaggcgctccctcctggcctgcgcacgccgctggcggtgccgtgc
tcgtaccccggccccttcggaatggtccctcacctggggatgaacggcgagctgagcgga
gcgggtgccccctacaccggcctgcatagcatgagcactgtggccgcggcggccgtggcc
gcttacggacgcacgcaagtggtgggattcgaccctcaccatcacatacgtgtccccggc
cttcctccgaacctttcaggcattcccggtggcaaaccagcctactcgtttcacgtgagc
gccgacgggcaaatgcaaccggtccctttccccccggacgctctgatcggcccggccatc
ccgcgtcacgcgcgacagatcaacacgctcaaccacggggaggtggtgtgcgccgtcacc
atcagcaacccaacccgccacgtttacaccggcggcaagggctgcgtcaaggtgtgggac
atcagtcaccctggcaacaagacctccgtgtcgcagctggactgcctcaacagggacaac
tacatccgctcctgtcgactgctccccgacggacgcacgctcattgtgggaggtgaggcg
agcactttgtcaatatgggacttggccgcaccgactccgcggatcaaggcggaattaacg
tcatcggcccccgcctgctacgccttggctatcagccccgactccaaagtctgcttttcg
tgctgctccgacggaaacatcgccgtctgggaccttcacaaccagactctggttcgacag
ttccagggccacactgatggagcgagctgcatcgatatctccaacgatggcaccaagctt
tggacgggaggcctggataacaccgtccgctcctgggatctccgagaaggccgccagctg
cagcagcacgacttcacctcgcagatcttctcgctgggatactgtccgaccggcgagtgg
ctggcggtgggaatggagaacagcaacgtggaggtcctgcacgtctccaaacctgacaag
tatcagctccacctccacgaaagctgcgtgctctcgctccgatttgcgcactgcggaaag
tggttcgtcagcacgggaaaggacaatttgctcaacgcctggaggaccccgtacggtgcc
agcatatttcagtccaaggagtcgtcttcagtgctgagctgcgacatctccgtagatgac
aagtacattgtgaccggctccggagacaagaaggccactgtctatgaggtcatatactag
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