Syngnathus scovelli (Gulf pipefish): 125994327
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Entry
125994327 CDS
T08785
Symbol
ubox5
Name
(RefSeq) RING finger protein 37
KO
K10600
U-box domain-containing protein 5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125994327 (ubox5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125994327 (ubox5)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
U-box type E3
125994327 (ubox5)
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GFIT
Motif
Pfam:
DUF5918
U-box
zf-RING_5
zf-RING_UBOX
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
125994327
NCBI-ProteinID:
XP_049619563
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Position
3:complement(19532954..19537416)
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AA seq
592 aa
AA seq
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MVVNLCLPHFNTSICCNKLCADGYDVTNLISADPTVQRRGFKLEYFLRPPVQVTLRFGFR
VELCRVDVELWPWGMDRGQCSKRLEISTSSDPLPPPNFGQDQFKNGLREEQKSRKQEEPR
QARQSNGHQCSLQAQKWGGKASDVSQQKPQTQSGSFEQDFKLVGRCELKEETKVSFSRPP
FHLRPPFVCPPPPRPSDSRQEELWSRGHLSLTSVTQLRVTLPFGGSASALGLKALAVWGL
PAHSCPPEEVEKIEHAQKASQRSRCGHVKATVNQIKQSCSDTPSAECLNSIPEEFLDPIT
QEVMSLPMLLPSGVSVDSTTLEEHQKREASWGRPTSDPFTGVPFTATSQPLPNPQLKRRI
DHFVLQNGGARRDGMTGRSGESEKPNASRLIGSLAANIVEDNVTGQSSDSGNIPHDSKLC
NKNTTLNLNGGRKRHLSGSEADVPQLLPQAKQPRSHTTPGPSSGGSHEQHLSASLDDALI
AVLKGRPSFTSNLSTRGTAAPLTGSVEPSTVRQATAAGERTCSSCSCALSPYSMPASPVY
RLLCGHLLCRPCLQSYSAPALNSITTMTSSARFLCATCRTPSSRSDILRVHH
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggttgtcaatctttgcctgccacacttcaatacgagcatatgttgcaataagttgtgt
gcagatggttatgatgtcacaaaccttatatcagcggatcctactgtgcaaaggcggggc
ttcaagctggagtactttttacgtcctcctgtgcaggtaacgttaaggttcggcttccgg
gtggagctgtgcagagtagatgtggagctatggccttggggcatggaccgaggacagtgc
agcaagagactggagatcagcaccagctctgatccgcttcctcctccgaattttggccag
gatcagtttaaaaatggcctccgggaggagcagaagagcagaaagcaagaagaaccacgt
caagctcgtcagtcgaatggccatcagtgtagtctccaggctcagaagtggggtgggaag
gcttcagatgtgtctcagcaaaagcctcagactcaatcaggcagttttgagcaagacttt
aaactggtgggccgttgtgagctcaaggaggaaaccaaagttagtttctcccgtcctcct
tttcacctgcggcccccctttgtgtgcccgcctcctcctcgccccagcgacagtcggcaa
gaagaactgtggagccgaggacacctttccttgacatccgtcacgcagctccgcgtgaca
ctgcctttcggcggctcggcatccgctctgggtctcaaggctttggcggtttgggggctg
ccggctcattcctgccccccagaggaagttgagaagattgagcacgctcaaaaagccagt
caaaggtcacgatgtggccatgtcaaagcaactgtcaatcaaattaagcagtcctgctca
gacacaccaagcgcagaatgtctaaattcaatcccagaggagttccttgaccccatcacc
caggaagtaatgtcgctccccatgctgcttccaagcggcgtgtcagtggacagcaccacc
ctggaggagcaccagaaacgggaagcctcgtgggggagaccaacgagcgaccccttcacc
ggcgtccccttcaccgccacctcccagccactccccaatcctcagctgaaaagacgaatc
gaccacttcgtcctgcagaacggcggcgcgaggagggacgggatgacagggagaagtggg
gagtcagaaaagccaaacgcctccaggttaattggctctttggcggcaaatatagtagag
gacaacgtaacgggacagtcgtcagattctggaaacattccacacgactcgaagctttgc
aacaaaaacacaacgctaaatcttaacggcgggaggaaacgacacctgagtggatcagag
gcagatgtgccacagctactacctcaagcgaaacaaccaagaagtcacacaacaccaggg
ccaagcagcggtggctcgcatgagcaacatctgtcagccagcctggacgatgctctcata
gccgtcttaaaggggagaccctcctttacgtcaaacttatccacgcgggggactgccgct
cctctcaccgggtcagtggagccctcaactgtacgacaggctactgctgcaggcgagagg
acgtgttcatcttgttcctgcgcgctctccccatactcgatgccggcatccccagtttac
cggctgctctgcggccacttgctgtgccgcccctgcctccaaagttactcggcacctgcg
ctcaactccatcaccaccatgacatcctccgcccgcttcctgtgcgcaacctgccgaact
ccctcgtctcgtagcgacatcctccgcgtgcatcactag
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