Syngnathus scovelli (Gulf pipefish): 125994344
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Entry
125994344 CDS
T08785
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03022
Basal transcription factors
sscv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125994344 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
125994344 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125994344 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125994344 (gtf2h3)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125994344 (gtf2h3)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125994344 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
125994344
NCBI-ProteinID:
XP_049619601
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All DBs
Position
3:17607608..17611358
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AA seq
299 aa
AA seq
DB search
MASEEEISLLVIVVDVNPIWWGQQIQREPQFTLSKCMDAVMVMANSHVAMSRNNKLAVIA
SHCQDSHFLYPSKSQSDGDGTQDDACSSGDGKYELLSIANGIIADRIRNLMSNIEVTGGS
TDTLLAGSLAKALCYINRVSKELEVGQEVKSRILVIKAADDCALQYMNFMNVIFAAQKQS
ILIDACVLESDSGLLQQACDITGGLYLKIPQKAALAQYLLWVFLPDGEQRSQLVLPPPAH
VDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPQMVKGKKKKFKAS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagaagaggaaatcagcttgttggtcattgtcgtggacgttaacccgatttgg
tggggccagcaaatccagcgtgagccgcagttcacgctgtccaaatgtatggatgccgtt
atggtgatggctaactctcacgtggccatgagcaggaataacaagctggccgtcatcgcc
agccactgtcaagacagtcactttctgtatcccagtaagagtcagtcagatggagatggc
acccaagatgacgcgtgctccagcggtgacggcaagtacgaactgctgtctatcgccaac
ggcatcattgctgaccggatcagaaacttgatgtccaacattgaagtgacgggaggttcc
accgacactttgctggctggatctctcgccaaagctctctgctatattaacagagtttca
aaggaacttgaagtgggacaggaagtcaagtctcgaattttggtgataaaggcagcagac
gattgcgctctgcagtacatgaacttcatgaacgtgatcttcgctgcccagaagcagagc
atcctgatagatgcgtgcgtgttggagtcagactcggggctcctacagcaagcctgtgat
ataacgggtggcttgtacctaaaaatcccccagaaagcggccctggctcaatacctgctg
tgggtgttcctgcctgatggcgagcaacgttcacagctggtgctgccaccgccagctcat
gtggactacagggcggcgtgcttctgccaccgcaacctcattgagatcggttacgtctgc
tctgtctgcctgtccatattctgcaacttcagccccatctgtacaacctgcgagacggct
ttcaaaatccagctcccacaaatggtcaaaggcaaaaagaagaaattcaaagcatcatga
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