Syngnathus scovelli (Gulf pipefish): 125994398
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Entry
125994398 CDS
T08785
Symbol
ebf2
Name
(RefSeq) transcription factor COE2 isoform X1
KO
K09103
early B-cell factor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125994398 (ebf2)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
125994398 (ebf2)
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
125994398
NCBI-ProteinID:
XP_049619683
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Position
3:16095628..16123619
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AA seq
591 aa
AA seq
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MFGIQEHLMREVSGLKERSIGEEMDPVRSWVRNVGVVDANVAAQSGVALSRAHFEKQPPS
NLRKSNFFHFVLALYDRHGQPVEVERTAFVDFVEHDKEQTGEKTNNGTHYKLQLLYSNGV
RTEQDLYARLIDSVTKQPISYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKTAGNPRDMRRFQVVLSSTVSVDGHVLAVSDNMFVHNNSKH
GRRARRLEPGESAENTMEYATPCIKAISPSEGWTTGGAMVIVIGENFFDGLQVVFGSMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDPEKMAKEILLKRAADLVEALYGNPHSNQDMLLKRAADIAEALYSVPRPHSQ
LQALPSSPAHGSVMGLGSYPSQLGVSIGEPGQSSQGYIRNSSSLSPRGYSSASTPQQSGY
GGGGGMTGGYGTVPMTSLGVPGSPGFSSASPTGSPYIMPSSPTIPGSSSSSSSLLPFSSF
PSAAKQKSAFAPVLRPQGSPSPACPASGGNSFRGSHPTHYLTPLSELTNAV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggatccaggagcatttgatgcgagaagtgagcggattaaaagaaagaagtata
ggagaggagatggatccagtccgctcttgggtgcgtaatgtcggggtggtggatgccaac
gtcgctgcgcaaagtggagtggccctgtccagagctcactttgagaagcaacctccctcc
aatctgcgcaagtccaacttcttccactttgtgctggcgctctacgaccgacacgggcag
ccagtggaagtggagaggacggcttttgtggactttgtggaacacgacaaggagcagacg
ggagaaaagaccaacaacggcacccactacaagctccaactactctacagcaacggggtc
cgtacagagcaagatctttatgcacgacttatcgactcagtcacaaaacagccaatatca
tacgagggccaaaacaagaatcccgagatgtgcagagttctgctcacgcatgaggtcatg
tgcagccgctgttgtgagaagaagagttgtggtaaccgaaatgagacgccctctgaccca
gtcatcattgacaggttcttcttgaagtttttcttgaaatgcaaccagaactgtctgaag
acggcaggaaaccccagggacatgaggagattccaggtggtcctgtccagcactgtgagc
gtggacggccacgtcctcgcagtgtctgacaacatgttcgtccacaacaactctaaacac
ggtcgtcgggctcgccgactggagccaggcgagtccgcggagaataccatggagtatgcc
accccttgtatcaaagccatcagtcccagtgagggctggactacaggcggggccatggtc
attgtcattggggagaacttctttgatgggctgcaggtggtgtttggaagcatgttagtt
tggagtgagctaatcacgccgcacgctatccgtgtccagactccgcctcgtcacatccca
ggggtggtggaggtcacactgtcttataaatcgaaacaattctgcaagggagcccctgga
cgcttcatctacacagccctgaatgagccgacaatagactacggtttccagaggcttcag
aaagtaattccacgacatcctggtgacccagaaaaaatggctaaggaaattctgcttaag
agggcagcagatcttgtggaggctctgtatgggaatccacacagtaatcaggacatgtta
ctaaaaagggcagcggacattgcggaggccctctacagtgttccccgtcctcacagtcag
ctgcaagcacttcccagctcaccagcccatggcagcgtcatgggtttgggttcctaccct
tcccaattaggtgtcagcatcggggagccagggcagagcagccaaggttatattcgcaac
tcaagcagcttatcaccaagaggttactcctcagcgtccacacctcagcagtcaggctac
ggaggcggcggtggtatgacgggaggctatggaaccgttcctatgaccagtctcggggtt
cctggctcacctggcttcagcagcgcttcccccacgggatccccctacataatgccctcc
agcccgaccatacccggaagctccagctcgtcgtcatctctgttgcctttctcctctttc
ccttccgctgctaaacagaagagtgcttttgctcccgtgctcaggccccagggttccccc
tccccggcctgccccgcctcaggggggaacagcttcagaggtagccatccgactcactat
ctgaccccgctctccgaacttacgaatgcagtctaa
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