Syngnathus scovelli (Gulf pipefish): 125994463
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Entry
125994463 CDS
T08785
Symbol
rnf180a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125994463 (rnf180a)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125994463 (rnf180a)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125994463 (rnf180a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_6
Siva
Motif
Other DBs
NCBI-GeneID:
125994463
NCBI-ProteinID:
XP_049619754
LinkDB
All DBs
Position
3:18994737..19000060
Genome browser
AA seq
416 aa
AA seq
DB search
MGLKGAAMSSHVGVSGGNESSIRGEQLLRPVLPGRKVHSEIRRDGDERRQARSWEKRGRL
RKCVSIENVGNGSEEGGSTESLSSSGSDQVESAVGSNAVASGGAIMNKTALQHPQAAGRC
SPPSLTSVRNRSPVPSRPQRASSSGTTSVRPPSRPPREPCWTPGGLSQTLTNAEGETHLD
EEEEGGGVMDVTSPSRITVPERMSKKERKRIKCARRRQKRKERWRQSQLQGSTGSITSSS
DEDEEDVSKEGYMCAVCLDVYFSPYMCQPCKHIFCEPCLRTLAKNCPASTPCPLCRTIIT
HVFFQKELNQMVRTFFPKEYACRKQNFQKATCAKWPLPSCRKLFRIFGGFRPSSPMARRQ
LPRAGGGFRLSALDFDDDGRGWHFDMDMVIIYIYSVNWIVGFFIVCILCYLFFPSF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggggcttaaaggtgcagccatgagctcccatgtgggggtcagcggtgggaacgagagc
agcatccgtggggagcaacttctgcgaccggtgcttccaggaaggaaagtccacagcgag
ataagacgggatggagatgaaagaagacaggcaagaagttgggagaaaagagggagactc
aggaagtgtgtcagtattgaaaatgttggcaatggatcagaagagggaggaagcacagag
agtctgtccagctctggttcagatcaagtggaatctgcagttgggtcaaacgcagtggct
agcggcggtgccatcatgaataaaaccgctcttcagcatccacaagcagcggggaggtgt
tcacccccatctctcacctccgttcgaaacaggtcacccgtcccctctcgccctcagaga
gcttcatcatccgggaccacctcagtgaggccacccagccgtcctcccagagagccatgc
tggacacctggcggcttgtcacagactttgaccaacgctgagggagagacccacttggac
gaggaggaagagggcggaggtgtgatggacgtgacgagcccatctcggatcacggtgccg
gagaggatgagcaagaaggagaggaagagaatcaaatgtgcgaggaggaggcagaagagg
aaggagcgatggaggcaaagtcagctgcagggttccacaggaagcattaccagcagcagc
gatgaggatgaagaagacgtgagcaaggagggatacatgtgcgccgtgtgcctagacgtc
tacttcagcccgtacatgtgtcagccatgcaagcacatcttttgtgaaccttgcctgagg
acattggccaagaactgtcctgcgagtacgccctgccctctctgcagaaccatcatcacg
cacgtcttcttccagaaggagttgaatcaaatggtaaggacgttcttcccaaaggaatac
gcatgtcggaaacaaaacttccagaaagcgacttgtgcgaaatggcctctgccgagctgc
agaaaactcttcagaatatttggaggtttcaggccttccagccccatggcgcgacgtcag
ttgccccgtgcgggcggcggcttccgtctgagcgcgttggattttgacgacgacggccgc
gggtggcactttgacatggatatggtcatcatctacatttactctgtcaactggattgtt
ggcttcttcatagtttgcatcctctgttatctctttttcccctctttttga
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