Syngnathus scovelli (Gulf pipefish): 125994468
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Entry
125994468 CDS
T08785
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125994468 (tfip11)
Spliceosome [BR:
sscv03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
125994468 (tfip11)
Other components
Complex C specific factors
125994468 (tfip11)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
betaPIX_CC
Motif
Other DBs
NCBI-GeneID:
125994468
NCBI-ProteinID:
XP_049619758
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Position
3:17029303..17033811
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AA seq
833 aa
AA seq
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MSMSHLYGRRDAEEDGVDIEKFEITDWDLANEFNPDRRRHRQTKEQMTYGIWAEGDSDED
ERPQFGGKRSKDYTAPVNFVSAGLRKTASDEKQQEEEEEGPDDSDDDVPSAPPPPRVLTT
KKLQKGNFRGNQSQRFAGGVQTGQGIGTWEKHTKGIGQKLLQKMGYQPGRGLGKNAQGIV
NPIEAKVRKGKGAVGAYGNERTVQSLQDFPVVDSDEEEEKEFQKELGQWRKDPAATGARK
KPKYSYKTVEELKATGKLAGRSTGTSAGQLAQVKVIDMTGREQKVYSSYSQMSNKHSMPE
DGPPSTAMRDQKGSGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLSHESQAL
QTRLEEEQDAIRRMEAVLALVDRFPSGDTAPGEGPTLQECARIFETLQTDYYEEYKTMGL
ADLAVAVVHPLLKEKLCSWNPLKDSSYCLEEVGKWRVILESRNLLNNGQDSNMDPYHRLL
WEVWIPVMRSCVSSWQPRMVGPMVDCVELWSSLLPLWISDYLLEQLVLPRLQREVDAWNP
LTDTVPIHSWIHPWLPLLQSRLEPLYAPIRSKLANALQRWHPSDASARLILQPWKDVFSL
GAWEAFMVKNIIPKLALCLEELVINPHQQQMEPFNWVIDWEGMLSPSSLVSLLDKNFFPK
WLQVLCSWLSNSPNYEEITKWYLGWKTMFSDVLLSQTVIKDKFNEALDIMNRAVSSGMGG
YMQPGARENIAYLTQTERRKDFHYEAMQERRDAESVAHRGASVSVPTNFKDLIQTKAEEN
NIVFMPIVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtcacacctgtatggacggagggatgcagaggaagatggtgtagatattgaa
aaatttgaaatcacagattgggatttggccaatgagttcaacccagaccgccgcagacac
agacagaccaaggagcagatgacttatggcatctgggcggaaggtgactctgatgaggac
gagagaccccaatttggaggcaagagatctaaagactacactgctccagtgaactttgtg
agtgcgggattaagaaaaactgcctccgatgagaaacagcaagaagaagaagaagaaggt
cctgatgattctgatgatgatgttccttctgcaccaccaccgcctcgagtgctaacgact
aaaaagcttcaaaagggtaatttccgtggaaaccagtctcaaaggtttgcagggggtgtc
caaactggacaaggaattggtacttgggagaaacacacgaagggaattggtcaaaagctg
ctgcagaaaatgggctatcaaccaggcagaggcttgggcaagaacgcgcaaggtatcgtc
aatcctattgaggcaaaggtgcggaaaggaaaaggtgccgtgggtgcttatggcaatgaa
cgaaccgtacaaagtcttcaagattttcctgtagttgactcggacgaggaggaagaaaag
gagtttcagaaggaactaggtcagtggcgtaaagatccagctgccaccggagcaaggaag
aaacccaagtattcctacaaaactgtggaggaactgaaggctacaggcaaacttgccggg
cgcagcacaggaacatctgctggacagctggcacaagtcaaggtcatcgatatgactgga
agagagcaaaaggtatattccagctacagtcagatgtccaacaagcacagcatgccagaa
gacggtccgccaagcacggccatgcgagatcagaagggatccggctttgcacttcctgag
cttgaacataaccttcaacttttgattgaccttacggaacaagacatattacagtcggcc
cgccgcttgcagcatgagaaagatgtggttgtctcgctgagccatgagtctcaggcgctg
cagaccaggttggaagaagaacaagacgccatccgtagaatggaagcagtgctggcattg
gtggatcgtttcccttctggagacacagcaccaggcgagggacccactttgcaggagtgc
gctcgcatctttgagactttacagacagactattatgaggaatacaagacgatgggtttg
gctgacttggctgtagctgtagttcatcccttactcaaagaaaaactttgttcttggaat
ccattgaaggactcttcttattgccttgaagaggttggtaagtggcgggtaattctcgaa
tctagaaaccttctcaataatgggcaagattcaaacatggacccttaccacaggctgctg
tgggaagtgtggatcccagtgatgcggtcctgcgtctccagttggcagcctcgcatggtt
gggccaatggtggactgcgttgaactgtggtcttctcttcttccgctttggatctcagat
tatttgcttgagcagcttgttttaccgcggctgcagagagaggtggatgcgtggaacccc
ttaacagacacggtgcccattcactcatggatccacccttggctgcctcttctccaatca
cgtcttgaacctttatacgcacccatcaggagcaaactagctaatgctttgcagcggtgg
caccccagtgatgcctcagcacgcctcatcctgcaaccgtggaaagatgtttttagcctt
ggagcttgggaggccttcatggtgaaaaacatcatccctaaattagcgctgtgtctggag
gagctggttatcaatcctcaccagcagcaaatggagccctttaactgggtgatagactgg
gagggaatgctgtcaccatctagtctggtctccctgctggacaaaaacttctttccaaaa
tggctgcaagtcctgtgttcatggctgagcaacagtcctaattatgaggaaatcaccaaa
tggtacctcggttggaagaccatgttcagtgatgtcttgttgtcacagacagtcataaaa
gacaagtttaatgaagcgttggacatcatgaaccgtgcagtatcttcgggcatgggtgga
tacatgcaaccaggtgcgagagaaaacattgcatatctcactcagacggagagaagaaag
gacttccactatgaagctatgcaagagcgcagggatgcggagagtgtcgctcacaggggt
gccagcgttagtgtacccacaaacttcaaagatctcatacagaccaaggctgaggagaac
aacattgtgttcatgcccatagtggccaaacggcatgagggcaaacagctgtacacattc
gggcgtattgtcatctacatagacaggggtgtggtattcgtgcaaggagaaaagacgtgg
gttcccacatccctgcagagtctgatagatatggccaagtga
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